Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1054 ATGGGTTCGTATATGCAAAATCTATCTTCCTCTTTTAGATCGACATCATCATGGTTCGAGGTGTATGCTGCCTTCTCCACATTCATGATGCTCCTAAGAACAGCAATCAATGACCTAATACCCCAACCAATTCGGTCCTTCATAGCCTCAAAGCTAGAAGCTTTCTTCTCCAAATGTCAGTCAAACAGCCAAATCTCTCTCAAAATTAACCAATTTTGGGATGAATCTGTTGGAGAACGCAATGACCTGTTCTATGCTGCCCATGAGTACCTTCCCTCTAGAATAACCCGCACCTACAAAAGCCTCAAAGTTGGCAAATTAGAAAACCACAAACATCTTGAGCTCGCAGTGGATGGAAGTGAAGAAGTGGTGGACGAATTTGAAGGCACCAAATTCACTTGGATGCTTGATGAAGGATCCGAAAAGGAGTCTAGTAGCAACAAGAAGTTTACCTTCATATTAACCTTCAATGAGAAGCACAGAGAGAGAGTGTTGGATAGGTATATACCCCACGTGCTTAAAACATACGAAGCCATGAAAGCTGAGCAAAAAATTGTGAAAATCTATTCAAGGTTATTTGATTATTGGAACGAAAGTGAGTTATCACACCCTGCCACGTTTGACACACTAGCCTTGGCCCCTGAGTTGAAGCAAGCTATCATTGATGATTTGGATCGGTTTCTAAGGAGGAAGGAACTTTACAAGAAAGTGGGTAAGCCTTGGAAGCGTGGCTACCTATTGTATGGGCCTCCCGGAACCGGAAAATCTAGCCTCATTGCAGCTATTGCTAACTATTTGAAATTTGATGTCTATGATTTGGAGCTTAGTTCTGTGTTTTCCAACTCTGAACTTATGCGAGCCATGAGGGAAACAACCAATCGTTCCATCGTTGTCATTGAAGACATAGATTGCAACAAAGAGGTGCATGCTCGATCAAAAGCAGACGATCTTCCAGACCAAGATTCCTCTGACGACGAGGGTGCCAATGCCAAGGTTAAGCCTGGGAGGTTTACTCTGTCGGGTCTGCTTAACTACATGGATGGGTTGTGGTCAAGCTGTGGAGAGGAGAGAATTATAATATTCACTACTAACCACAAAGAGAAAATAGACCCAGCGTTGCTGCGTCCCGGTCGTATGGACATGCACATTAATTTATCCTTCCTCAAAGGCAAGGCATTTAGAATATTGGCTTCAAATTATTTGGGTATTGAAGGAGATCATCCTCTCTTTGAACAAATTGAAGGACTATTGGACAAAATACAAGCCACCCCTGCTGTTGTAGCAGAGCATCTAATGAGAAGTGAGGATCCCAACGAGGCTTTGGAAGCACTTGTCAAATTTCTCGAAGAAATATGCAAGGACAATCCAGTAGAATGCCAGTTGAATACGGGACTAGTCAATGTAGCCTAA 1410 0.4277 MGSYMQNLSSSFRSTSSWFEVYAAFSTFMMLLRTAINDLIPQPIRSFIASKLEAFFSKCQSNSQISLKINQFWDESVGERNDLFYAAHEYLPSRITRTYKSLKVGKLENHKHLELAVDGSEEVVDEFEGTKFTWMLDEGSEKESSSNKKFTFILTFNEKHRERVLDRYIPHVLKTYEAMKAEQKIVKIYSRLFDYWNESELSHPATFDTLALAPELKQAIIDDLDRFLRRKELYKKVGKPWKRGYLLYGPPGTGKSSLIAAIANYLKFDVYDLELSSVFSNSELMRAMRETTNRSIVVIEDIDCNKEVHARSKADDLPDQDSSDDEGANAKVKPGRFTLSGLLNYMDGLWSSCGEERIIIFTTNHKEKIDPALLRPGRMDMHINLSFLKGKAFRILASNYLGIEGDHPLFEQIEGLLDKIQATPAVVAEHLMRSEDPNEALEALVKFLEEICKDNPVECQLNTGLVNVA* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1054 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 450 IPR027417 -
Apr7g1054 469 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 11 455 - -
Apr7g1054 469 PANTHER BCS1 AAA-TYPE ATPASE 11 455 - -
Apr7g1054 469 CDD AAA 230 386 - -
Apr7g1054 469 Pfam ATPase family associated with various cellular activities (AAA) 246 385 IPR003959 GO:0005524|GO:0016887
Apr7g1054 469 ProSitePatterns AAA-protein family signature. 357 375 IPR003960 GO:0005524|GO:0016887
Apr7g1054 469 SMART AAA_5 241 389 IPR003593 -
Apr7g1054 469 MobiDBLite consensus disorder prediction 310 331 - -
Apr7g1054 469 Gene3D - 384 450 - -
Apr7g1054 469 MobiDBLite consensus disorder prediction 310 332 - -
Apr7g1054 469 Pfam Domain associated at C-terminal with AAA 40 136 IPR025753 -
Apr7g1054 469 Gene3D - 197 383 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1054 Apr-Chr7 17503921 17505602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1054 206 385 Miscellaneous Gene Families AT3G47060 32.105 2.31e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1054 - K08900 gmx:100789094 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1054 7 17503921 17505602 Apr7g1054 7 17503921 17505602 ECH