Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1053 ATGAGAGCTTCAATTGAGAGTCTCTCTTCCTCCTTTACAAACTTCCGTTCAGCAACATCATGGTTCGAGGTGTATGCTGCCTTCTCCACATTTATGATGATTCTAAGAACCGCAATGAACGATCTCATACCCCAACAAGTTCGTTTATTCATCACCTCAAAGCTAAAAGCTTTCTTCTCAGACCGCCAAAACAGTCATCAAGTCTCACTTCAGATCAACCAGTTTTGGGAAGGCCAAACCAACCAACTCTTCCAAGCGGCCCAAGAGTATCTCCCAGCTAGAATAACCCACACCTACAAATCCCTCAAAGTTGGCAAGCTACCAAAGCATAAGAGCGTAGTAGTGGCTGTGGATGGAAAACAAGAGGTTGCGGATGAATTTGAAGACATCAAGCTCAAGTGGAAGCTTATTGAAAGTAGTTACAAAAGGGATCATCCTGAACATCCCAAGTCAAACGAGCAACTTTCCTTTACGCTAAGCTTTGATGAGAAACATAGAGATAAAGTAATGAACAAGTATATTCCACATGTTCTAAGCACTCACGAGGTCATCAAAGCAAAGCAAAGGACGATAAAGATCCATTCCATGATCTCTAGGCACTGGCAGAAAAGTGACTTAACACACCCAGCTTCATTTGACTCGCTTGCATTGGATCCTGAGCAAAAGCAGGCAATTATTGATGATTTAGATAGGTTTTTGAGGAGGAAGGAATTGTATAAGAAAGTGGGTAAGCCTTGGAAACGTGGGTACCTTTTGTATGGGCCTCCGGGAACAGGAAAATCTAGTCTTATTGCAGCTATGGCTAACTACTTGAAATTTGATGTGTATGATTTGGAGCTAAGCTCTGTGTATTCTAACTCCGACCTCATGCGAGCCTTGAGGGACACATCTAACCGTTCCATCGTCGTCATCGAAGACATAGACTGCAACAAAGAGGTTCTTGCTCGACCAAACACAGACACTTATTCAGATCCAGATTCTGATTCTGACTCCAAGCCTGTCAAGGTTAAGAGTAGGCTTACTCTGTCTGGTCTGCTTAACCACATGGATGGATTGTGGTCAAGTGGTGGAGAGGAACGAATTATAATATTCACTACTAACCACAAAGAAAGAATAGACCCAGCATTGCTGCGGCCAGGTCGTATGGACATGCACATTAACTTGTCCTTCCTAAAAGCCAAGGCATTTAGAATCTTAGCTTTGAATTATTTGGGCATTGAGGGAGATCATCCACTCTTTGAACAAATCGAAGGCCTATTGGACAAAATACAAGTCACCCCTGCAGTTGTTGCAGAGCAACTAATGAGGAATGAGGATCCTGACGTTGCTTTGGAAGCACTTGTTAAATTTCTCGAGGAAATGTATGTGAACACCCTACTTTTAGAATCATGA 1392 0.4267 MRASIESLSSSFTNFRSATSWFEVYAAFSTFMMILRTAMNDLIPQQVRLFITSKLKAFFSDRQNSHQVSLQINQFWEGQTNQLFQAAQEYLPARITHTYKSLKVGKLPKHKSVVVAVDGKQEVADEFEDIKLKWKLIESSYKRDHPEHPKSNEQLSFTLSFDEKHRDKVMNKYIPHVLSTHEVIKAKQRTIKIHSMISRHWQKSDLTHPASFDSLALDPEQKQAIIDDLDRFLRRKELYKKVGKPWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSSVYSNSDLMRALRDTSNRSIVVIEDIDCNKEVLARPNTDTYSDPDSDSDSKPVKVKSRLTLSGLLNHMDGLWSSGGEERIIIFTTNHKERIDPALLRPGRMDMHINLSFLKAKAFRILALNYLGIEGDHPLFEQIEGLLDKIQVTPAVVAEQLMRNEDPDVALEALVKFLEEMYVNTLLLES* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1053 463 ProSitePatterns AAA-protein family signature. 360 378 IPR003960 GO:0005524|GO:0016887
Apr7g1053 463 PANTHER BCS1 AAA-TYPE ATPASE 14 457 - -
Apr7g1053 463 CDD AAA 235 389 - -
Apr7g1053 463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 439 IPR027417 -
Apr7g1053 463 Gene3D - 201 386 IPR027417 -
Apr7g1053 463 Gene3D - 387 458 - -
Apr7g1053 463 Pfam Domain associated at C-terminal with AAA 43 137 IPR025753 -
Apr7g1053 463 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 14 457 - -
Apr7g1053 463 Pfam ATPase family associated with various cellular activities (AAA) 251 388 IPR003959 GO:0005524|GO:0016887
Apr7g1053 463 SMART AAA_5 246 392 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1053 Apr-Chr7 17500047 17501869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1053 239 434 Miscellaneous Gene Families AT3G02450 31.401 8.59e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1053 - K08900 gmx:100787726 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1053 7 17500047 17501869 Apr7g1053 7 17500047 17501869 ECH