Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1052 ATGTTTTCCCCAAGAGACATGCCTTCTCCTTCCTCAATCTTCTCTGCCTATGCCTCCATGACAGCCTCTATGATGCTTCTGCGTTCCATGGCCAACGAACTCGTACCCCAACCAATTCGTGGCTACCTTTTCAATGCTTTTCGCTACCTCATCAAGCCTCGTTCGCCTACGCTCACCCTCATCATCGAAGAGTCCACCGGCATAGCTCGCAACCAAGTCTTCGATGCTGCAGAGGCTTATCTCTCCACCAGAGTCAGCCCCGACAACGAAAGACTGAAAATCAGCAAGAGTCCAAAGGAGAAGAAACTAACCATTCGGCTCGAGAAGGGTGAGAGGGTAGTTGATTACTTCGACGGGGCATGCTTCAAATGGAGATTCATTTGTGCAGAAACAGAAAAGAACAGCCTCAACGATCATAACAACGTCTCCATAAGGTCAGAAAAGCGGTATTTTGAGCTTAGTTTCCCCAAGAAGCAGAGGGAAATTGTTTTGGACTCTTACTTGCCCTTTATTCTTGACAAAGCCAAGGAGATGAAAGATGAGGAAAGGGTGTTGAAGATGCACACTCTGAACACTTCCTTTTGTTATTCTGGGGTAAAATGGGACTCCATTAATCTGGAGCATCCGTCAACTTTTGAAACGCTGGCTATGGAGCCAGAGCTGAAGAATGCTGTGATAGAGGACCTAAACAGGTTCGTGAAGAGGAAGGAGTTCTACAAGAGAGTTGGGAGGGCGTGGAAACGTGGGTACTTATTATATGGCCCTCCGGGTACTGGCAAGTCTAGCTTGATTGCAGCTATGGCTAATTACTTGAAGTTTGATATCTATGACCTACAACTTGGGAACATAGTAAGGGATTCCGACCTCAGAAAATTGCTTTTGGCTACGGCAAATAGGTCCATTTTGGTCATTGAAGACATTGATTGCAGTGTGGATCTGCCTGAGCGTCGCCATGGAGATGGACATGGTCGTAAACAAGCTGACGTACAGTTGACATTGTCTGGGTTACTGAACTTCATAGATGGACTATGGTCGAGTTGTGGAGACGAAAGAATAATCATATTCACGACCAACCACAAAGAAAGGCTAGACCCTGCTCTGTTAAGGCCCGGAAGAATGGACATGCACATTCACATGTCCTATTGTTCCTACCAAGGCTTCAAGCTTTTGGCCTCAAATTACTTGGAAATTTCCTCTGATCACCACCTCTTTGGGGAGGTAGAGGGGCTAATAGAGGACATACAAATAACCCCTGCTCAAGTGGCAGAGGAATTGATGAAGGATGAGGACTCAGAGGCCACACTTGAAGGTTTCGTGAAGCTTCTTAAGCGGAAAAAGATGGAGGGTGATGTATGTGAAAACTATGGTCCAGATAAAGCAGAACCTTCTCATCAAAAATCTAAAAGGCGCAAGGTTGGTTGCAAGCAAAAGCGTGGTGTTGGGAATGGTGTAGTTACCCAAAGGAGGACAAGGAGAATTAGGAGAGGGTGTAGTTTGTAA 1500 0.46 MFSPRDMPSPSSIFSAYASMTASMMLLRSMANELVPQPIRGYLFNAFRYLIKPRSPTLTLIIEESTGIARNQVFDAAEAYLSTRVSPDNERLKISKSPKEKKLTIRLEKGERVVDYFDGACFKWRFICAETEKNSLNDHNNVSIRSEKRYFELSFPKKQREIVLDSYLPFILDKAKEMKDEERVLKMHTLNTSFCYSGVKWDSINLEHPSTFETLAMEPELKNAVIEDLNRFVKRKEFYKRVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLGNIVRDSDLRKLLLATANRSILVIEDIDCSVDLPERRHGDGHGRKQADVQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYQGFKLLASNYLEISSDHHLFGEVEGLIEDIQITPAQVAEELMKDEDSEATLEGFVKLLKRKKMEGDVCENYGPDKAEPSHQKSKRRKVGCKQKRGVGNGVVTQRRTRRIRRGCSL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1052 499 Gene3D - 199 377 IPR027417 -
Apr7g1052 499 Pfam Domain associated at C-terminal with AAA 35 127 IPR025753 -
Apr7g1052 499 Gene3D - 378 449 - -
Apr7g1052 499 PANTHER BCS1 AAA-TYPE ATPASE 6 464 - -
Apr7g1052 499 CDD AAA 235 381 - -
Apr7g1052 499 ProSitePatterns AAA-protein family signature. 351 369 IPR003960 GO:0005524|GO:0016887
Apr7g1052 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 427 IPR027417 -
Apr7g1052 499 SMART AAA_5 246 383 IPR003593 -
Apr7g1052 499 MobiDBLite consensus disorder prediction 454 474 - -
Apr7g1052 499 PANTHER BNAA10G17020D PROTEIN 6 464 - -
Apr7g1052 499 Pfam ATPase family associated with various cellular activities (AAA) 251 380 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1052 Apr-Chr7 17492494 17495457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1052 226 396 Miscellaneous Gene Families AT5G53170 29.834 1.24e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1052 - - gmx:100789621 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1052 7 17492494 17495457 Apr7g1052 7 17492494 17495457 ECH