Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1047 ATGAAGCATTTTGCTTTAGCATTTCTTTTGGCCATTTTGGTCCCTCAGGAGTGTTTCCATGTCAGCGTGGAAGCAACGGATGATTTTGTCAGAACCAGAGGCATTCACTTCATGTTGAACGGATACCCTTTCTATGCAAATGGCTTCAATGCCTACTGGTTAATGTACACAGCTTCTGACCCATCTCAGAGATACAAGGTTTCAAATGCCTTCCGTGAAGCAACCAGTCATGGCCTTACTGTTGCTAGAACTTGGGCATTCAGTGATGGTGGTTATGGTGCCCTACAATATTCCCCTGGCTTCTATAATGAGCAAATGTTCAGGGGGTTGGATTTTGTAATATCTGAGGCCAGAAAGTACAGGATTAAGCTCATACTGAGCTTGGTGAACAACTATGAAAATTTTGGAGGAAAGAAGCAGTATGTGAACTGGGCTAGAAGTCACGGGCAGTATTTGACATCAGACGATGACTTCTTTAGGAGCCCTGTTGTTAAGGGTTACTACATAAACCATGTCAAGACTGTTCTTAACAGATACAACAGTTTTACTGGCGTCCATTACAAAGATGATCCAACAATCATGGCTTGGGAGTTAATGAATGAGCCTAGGTGCACCTCGGATCCTTCAGGAAGGACTATTCAGGTTTGGATCAGGGAAATGGCTTCTGTTGTAAAGTACATAGACAGGAATCACTTATTAGAGGCTGGGCTAGAAGGGTTTTATGGACAATCAACACCACAAAGAAAGAGACTCAATCCTGGTTTTGATGTTGGCACAGACTTCATCGCAAATAACCGAATCGCCAACATTGATTTTGCCACAGTTCACTGCTATCCTGATCAATGGGTATCAAGCTCAAGCGAGCAATATCAGGTTTCATTTTTGAACAACTGGCTGAGCGCTCACTTCGCAGACGCGGAACGTGCTATAAGGAAGCCAATAATGGTAGGAGAATTTGGGAAATCATTTAAGGATTCAGGTTACAGCACGTACCAGAGGGATGAGGTGTTCAATTCAGTGTACTACAAGATATATTTGTCGGCGAAAAGAGGAGGAGCAGCGGGAGGAGCACTCTTCTGGCAGCTTCTGACGGAGGGCATGGAGTCATTCCAAGACGGCTACGGAATAACGCTTGGCCAGAGTTCTTCTACGGCCAATGTCATTGCTCGTCAATCTCACAAGCTCTTCCTCATTCGGAAGATCTTTGGGAGGCTCGCCGACGCGCGCCGATGGAGGAGAGAGAGAGGGTTCTCCGCCTCCGGTGGAAACGGTCGCCGCCGCCACAGCCACATTGGCAACTGA 1302 0.4616 MKHFALAFLLAILVPQECFHVSVEATDDFVRTRGIHFMLNGYPFYANGFNAYWLMYTASDPSQRYKVSNAFREATSHGLTVARTWAFSDGGYGALQYSPGFYNEQMFRGLDFVISEARKYRIKLILSLVNNYENFGGKKQYVNWARSHGQYLTSDDDFFRSPVVKGYYINHVKTVLNRYNSFTGVHYKDDPTIMAWELMNEPRCTSDPSGRTIQVWIREMASVVKYIDRNHLLEAGLEGFYGQSTPQRKRLNPGFDVGTDFIANNRIANIDFATVHCYPDQWVSSSSEQYQVSFLNNWLSAHFADAERAIRKPIMVGEFGKSFKDSGYSTYQRDEVFNSVYYKIYLSAKRGGAAGGALFWQLLTEGMESFQDGYGITLGQSSSTANVIARQSHKLFLIRKIFGRLADARRWRRERGFSASGGNGRRRHSHIGN* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1047 433 SUPERFAMILY (Trans)glycosidases 29 388 IPR017853 -
Apr7g1047 433 PANTHER - 1 416 IPR045053 GO:0004553
Apr7g1047 433 Pfam Cellulase (glycosyl hydrolase family 5) 42 328 IPR001547 GO:0004553|GO:0071704
Apr7g1047 433 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 1 416 - -
Apr7g1047 433 Gene3D Glycosidases 25 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1047 Apr-Chr7 17458428 17460822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1047 1 428 Glycoside Hydrolase AT5G66460 65.814 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1047 K19355 - gmx:100792073 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1047 7 17458428 17460822 Apr7g1047 7 17458428 17460822 ECH