Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1044 ATGGGAACGTTGGGAAGAGCTTTCTACGCCGTCGGATTCTGGATCCGCGAGACCGGCCAAGCCCTCGATCGCCTTGGCTCTCGCCTCCAAGGCAATTACCTCTTCCAAGAACAACTTTCTAGGCATCGACCTCTCATGAATGTATTTGACAAAGCTCCTTCCGTTCATAGGGATGCATTTGTGGCCCCTAGTGCCTCCCTCGTCGGTGATGTTCACGTTGGCAATGCTTCGTCCATTTGGTATGGATGTGTCCTCAGAGGTGATGTTAACAGCATTATTATTGGATCTGGAACTAATATACAAGACAATTCTCTTGTTCATGTTGCTAAGTCGAATTTGACTGGAAAGGTGTTACCGACTATCATTGGAGATAATGTCACTGTAGGTCATAGTGCTGTGTTGCAAGGATGTACTGTTGAGGATGAGGCATTTATTGGCATGGGTGCAACATTGCTTGATGGTGTATATGTTGAGAAGCATGCCATGGTTGCTGCTGGAGCTCTTGTCAGGCAAAATACAAGAATCCCCTATGGAGAGGCTTGGGGAGGTAATCCGGCAAGGTTCTTGAGGAAGCTCACTGAAGATGAAATGACCTTCTTCTCACAATCTGCCTTAAATTACTCCAGTTTGGCTCAGGCTCATGCTGTTGAAAATGCGAAAAAACTTGATGAGACTGAATTTGTAAAAGTTCTTAACAAGAAATTTGCTCGTCGGGACGGGGAATATGATTCAGTGCTGGGTGTTGTTCGAGAAGCATCTCCAGAACTTAACGTTCCGGATAATGTTTTGCTAGACAAAGTTCCAAAGGCCTCTTAA 816 0.4547 MGTLGRAFYAVGFWIRETGQALDRLGSRLQGNYLFQEQLSRHRPLMNVFDKAPSVHRDAFVAPSASLVGDVHVGNASSIWYGCVLRGDVNSIIIGSGTNIQDNSLVHVAKSNLTGKVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYVEKHAMVAAGALVRQNTRIPYGEAWGGNPARFLRKLTEDEMTFFSQSALNYSSLAQAHAVENAKKLDETEFVKVLNKKFARRDGEYDSVLGVVREASPELNVPDNVLLDKVPKAS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1044 271 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Apr7g1044 271 PANTHER DYNACTIN SUBUNIT P25 1 270 - -
Apr7g1044 271 PANTHER YRDA, PUTATIVE-RELATED 1 270 - -
Apr7g1044 271 SUPERFAMILY Trimeric LpxA-like enzymes 45 210 IPR011004 -
Apr7g1044 271 CDD LbH_gamma_CA_like 54 212 - -
Apr7g1044 271 Gene3D Hexapeptide repeat proteins 44 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1044 Apr-Chr7 17441310 17443764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1044 K01726 - gmx:100794184 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1044 7 17441310 17443764 Apr7g1044 7 17441310 17443764 ECH