Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1028 ATGGGAGCAGCTAGGTTAACCTCGTGCGTGGCCGTAACAGCTGCTGCTGTGGCCTCCATGTCCACGCTCTCCGATCGTGCCTACGCCGAGTCTCCCTTTCGCTGGCCTTTCTTCACATCTTCCCCTTCCAATTCGCCTTCGCCGCCGAATCAGGCTTCTGACACCAAGTCGGAGCCTCCGGCGCCCGATGAACCCAATAGGTCGGGTTTCGACCCGGAATCGTTAGAAAGAGGAGCCAAAGCTCTCCGCGAAATCAACAATTCTTCCTATGCCAAACAGGTGTTTGATTTAATGCGGAAACAGGAACAAACTCGCCTTGCTGAATTAGACGCTGAGAAAGTTCATTATGAGCTGATTCAGTCTCAAGGAGATATTGAGAGGCAGCGGAAAATGGCTGAAGAACAACGGAATCTAATACAAGAGCAGGCCCAGAGACAGGCACAGGTGATGCGATATGAAGATGAATTGGCAAGGAAAAGAATGCAGGCAGATCATGAAGCTCAAAGGCAACATAATGTTGAATTGGTCAAGATGCAAGAGGAGTCTTCTGTAAGAAAGGAGCGGGCAAGACAGGCTACCGAAGAACAGATTCAATCTCAGCAGCGTCAAACTGAGAGAGAAAGAGCTGAAATAGAAAGAGAAACTATTAGAGTTAAGGCAATGGCAGAGGCTGAAGGCCGAGCCCATGAAGCAAAATTGACAGAGGATCATAACCGGAGAATGCTCATAGAACGAATGCAAGGTGAAAGAGATAAATGGCTTGCTGCAATTAACACAGCTTTTAGTCACATTGAAGGAGGTCTAAGGGTTTTATTGACTGATAGGGACAAATTGCTTATGACTGTTGGAGGAGCTACTGCACTAGCTGCAGGAATATATACAACTAGAGAGGGTGCTAAAGTCACATGGGGATATATTAATCGGATTTTGGGGCAGCCATCATTGATCCGGGAATCATCCATGGAAAAGTTTCCAGGGTCAAAGTTCATTTCTCAAGCCAAGCATAAATTTCTAAATTATAGTACTTCAGCCAGGGCAGAAAAGTCTGTCGGTAGTCAAAATGGTCTTGGGAATGTAGTCCTCCATCCATCACTGCAGAGAAGAATAGAGCATCTTGCACGGGCAACATCAAATACCAAGGCCCATCAGGCACCATTTCGTAACATGCTTTTTTATGGGCCTCCTGGCACTGGTAAAACAATGGTTGCAAGGGAAATAGCTCGAAAATCGGGTTTGGATTATGCCATGATGACTGGAGGAGATGTTGCACCTCTGGGCCCACAAGCTGTTACCAAAATTCATGATATATTTGATTGGGCCAAGAAATCTAGAAAAGGCCTATTGCTTTTCATTGATGAGGCAGATGCTTTCCTTTGCGAACGCAACAGCTCGCACATGAGTGAAGCTCAACGAAGTGCTCTAAACGCTTTGCTCTTCAGAACTGGTGATCAGTCTAGAGACATAGTACTTGTCCTTGCGACAAACAGACCAGGTGATCTTGATAGTGCAGTTACTGATCGCATTGACGAAGTGATTGAATTCCCTCTACCAGGAGAGGATGAGCGCCTAAAATTATTGAAGCTCTATTTAAACAAGTATCTGTGTGATGACAATAAAGGCTCCAAAGGGAGCTTCTTGCTGAAGAAGCAGCCCCAAAAGATTACCATAAAAGATTTATCCGAAGATGTGTTGAGAGAGGCTGCCAAGAAAACAGAGGGATTTTCTGGCCGTGAGATAGCCAAACTCATGGCCAGTGTCCAAGCTGCTGTATATGGACGCCCAGACTGCGTCTTGGATTCCCAGTTATTTAAAGAAATTGTAGATTACAAGGTGACGGAACATCATCAACGATTAAAACTTGCAGCTGAAGGCGGCCTGCCTGACCAAATACAACTTGTTTGA 1902 0.4569 MGAARLTSCVAVTAAAVASMSTLSDRAYAESPFRWPFFTSSPSNSPSPPNQASDTKSEPPAPDEPNRSGFDPESLERGAKALREINNSSYAKQVFDLMRKQEQTRLAELDAEKVHYELIQSQGDIERQRKMAEEQRNLIQEQAQRQAQVMRYEDELARKRMQADHEAQRQHNVELVKMQEESSVRKERARQATEEQIQSQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERMQGERDKWLAAINTAFSHIEGGLRVLLTDRDKLLMTVGGATALAAGIYTTREGAKVTWGYINRILGQPSLIRESSMEKFPGSKFISQAKHKFLNYSTSARAEKSVGSQNGLGNVVLHPSLQRRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHDIFDWAKKSRKGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEDERLKLLKLYLNKYLCDDNKGSKGSFLLKKQPQKITIKDLSEDVLREAAKKTEGFSGREIAKLMASVQAAVYGRPDCVLDSQLFKEIVDYKVTEHHQRLKLAAEGGLPDQIQLV* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1028 633 MobiDBLite consensus disorder prediction 36 57 - -
Apr7g1028 633 PANTHER PUTATIVE ATP-ASE 3 625 IPR039188 GO:0005739|GO:0007005
Apr7g1028 633 CDD AAA 381 516 - -
Apr7g1028 633 MobiDBLite consensus disorder prediction 161 210 - -
Apr7g1028 633 MobiDBLite consensus disorder prediction 161 193 - -
Apr7g1028 633 Pfam ATPase family associated with various cellular activities (AAA) 389 516 IPR003959 GO:0005524|GO:0016887
Apr7g1028 633 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
Apr7g1028 633 Gene3D - 332 536 IPR027417 -
Apr7g1028 633 Coils Coil 183 217 - -
Apr7g1028 633 Pfam ATPase family AAA domain-containing protein 3, N-terminal 54 317 IPR021911 -
Apr7g1028 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 610 IPR027417 -
Apr7g1028 633 MobiDBLite consensus disorder prediction 35 79 - -
Apr7g1028 633 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 3 625 - -
Apr7g1028 633 Coils Coil 125 145 - -
Apr7g1028 633 SMART AAA_5 385 518 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1028 Apr-Chr7 17333034 17338828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1028 365 592 Miscellaneous Gene Families AT5G53170 29.536 1.57e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1028 K17681 - gmx:100777755 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1028 7 17333034 17338828 Apr7g1028 7 17333034 17338828 ECH