Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1020 ATGGAAAAGCAACACGGTCCCGTAGCTCAGTTGGAAGTAGTAGTATCTGTAAGTCCACACTCCACAGAAGTTGGTGGTGTATTTATTGTGCCAGCCGCTTGTGGGACCGACCCCATACTTGTTCTGGAGTTCTCAATGCTTGTTCTTGAAAGCTGTCCATCTCAAACTGTTGAGCTCTTTCTGTCCGGAAATATTCCAGCTGATATGGTGAACTCATATTTGAAGCAGCATTCTCTAAACATGCAAGCTAGGTACTTGGAGTTTATGCTTGCAATGAATGAGAATGCCATATCGGGCAATTTGCAGAATGAAATGGTACACATCTATCTTTCTGAAGTACTCGAGTGGCATGCTGCTTTAAGTGCTCAACAAAAATGGGATGAGAAAGCTTATTCCCCAACAAGGAAAAAGCTATTGTCTGCCTTAGAGAGCATATCAGGATACAGTCCAGAGGCTTCGCTAAAACGACTTCCACCAGATGCTTTATATGAAGAGCGAGCAATATTGTTGGGAAATATGAACCAACATAAACTGGCATTATCTTTGTATGTTCACAAGCTTAATGTCCCGGAACTGGCATTGTCTTATTGTGATCGGGTCTATGAGTCTACTCATCTGCCATCTTTAAAATATTCCAGCAACATATACCTTGTGCTTCTACAAATCTATTTGAATCCTCGAAGGACCACATCAGGTTTTGAGAAGAGAATTACAAATCTGTTATCCCCACAGAATACAACCATTCCAAAAGTTAGTTCATTGACATCAGTAAAAAGTAGAGGCCGAGGATCAAAGAAAATTGCTGCAATAGAGGGTGCAGAAGACACAAAAGTTAGTTTGAGCAGCACTGACAGTGGCAGGAGTGATGGTGATGCAGATGAATACAGTGAGAGTGGTTCTACTATCATGCTTGATGAGGTCCTTGATTTGTTGAGCCGCAGGTGGGATAGAATAAATGGAGCTCAGGCTCTTAAACTTTTACCAAAAGAGACTAAATTACAGGACCTGCTTTCGTTTCTTGGACCCCTTCCGAGAAAATCTAGTGAAATGTACCGAAATTGTTCAGTGATAAAGAGCTTGAGACAGAGCGAGAACCTTCAGGTGAAAGATGAACTCTATGGTCAGAGGAAAGCAATTGTAAAGATAACCAGTGATAGCATGTGTTCTCTGTGCCATAAGAAAATAGGGACTAGTGTTTTTGCAGTCCACCCCAATGGGCAAAGGAGTAGGCAAAGGATCTCAATTGAGGAAGCGATTGTAAAACTGAAGGGCCATACCGATGGGTGGTCCAATTGTCTCGTGTGTGTGTACGCTTTTTACCCATGGTACCTGCTGGTCGGTGGATTATTACCGCAGTGA 1359 0.4246 MEKQHGPVAQLEVVVSVSPHSTEVGGVFIVPAACGTDPILVLEFSMLVLESCPSQTVELFLSGNIPADMVNSYLKQHSLNMQARYLEFMLAMNENAISGNLQNEMVHIYLSEVLEWHAALSAQQKWDEKAYSPTRKKLLSALESISGYSPEASLKRLPPDALYEERAILLGNMNQHKLALSLYVHKLNVPELALSYCDRVYESTHLPSLKYSSNIYLVLLQIYLNPRRTTSGFEKRITNLLSPQNTTIPKVSSLTSVKSRGRGSKKIAAIEGAEDTKVSLSSTDSGRSDGDADEYSESGSTIMLDEVLDLLSRRWDRINGAQALKLLPKETKLQDLLSFLGPLPRKSSEMYRNCSVIKSLRQSENLQVKDELYGQRKAIVKITSDSMCSLCHKKIGTSVFAVHPNGQRSRQRISIEEAIVKLKGHTDGWSNCLVCVYAFYPWYLLVGGLLPQ* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1020 452 MobiDBLite consensus disorder prediction 278 297 - -
Apr7g1020 452 PANTHER CNH DOMAIN CONTAINING 32 407 IPR032914 GO:0016192
Apr7g1020 452 Pfam Vacuolar sorting protein 39 domain 2 308 407 IPR019453 -
Apr7g1020 452 PANTHER VACUOLAR SORTING PROTEIN 39 32 407 - -
Apr7g1020 452 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 44 228 IPR000547 GO:0006886|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1020 Apr-Chr7 17245250 17248442 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1020 K20183 - aprc:113870289 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1020 7 17245250 17248442 Apr7g1020 7 17245250 17248442 ECH