Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1011 ATGAAGTGCCCGTACTGCACGGCGGCGCAGGGGCGTTGCGCCACCACGAGCTCGGGGCGCTTCATCACGGAGTGCACGTCTTGCGGGCGCGTGGTGGAAGAGCGACAATCGCATCCCCACCACGTGTTTCACCTGCGCGCCCAAGATAACCCTCTGTGCCTGGTCACATCGGATCTCCCTCTCCCCACCCTCCATCAAAACGACGAGGACCCATTCGAGCCCACGGGCTTCATCACCGCCTTCTCCACATGGTCCCTCGAGCCCAGCCCACTTTACCTTCAGTCCTCTCTCTCCTTCTCGGGTCACCTAGCCGAGCTCGAACGCACTCTCGAATCTTCCTCCTCCTCCTCTTCCTCTTCTTCCTCTTCCTCATCTACCGTCGTGGTCGATAACTTGAGAGCTTACATGCAGATTATTGATGTAGGGTCAATTCTAGGGTTAGATTGCGATATTTCCGACCATGCTTTTCAGTTATTCAGGGATTGTTGCTCCGCTACTTGTCTGAGAAATCGCAGTGTGGAGGCGCTTGCCACTGCTGCTCTCGTTCAGGCCATTAGAGAGGCTCAAGAGCCGAGAACTCTTCAGGAAATTTCAATTGCAGCGAATGTGCCACAAAAGGAAATTGGGAAATACATCAAGATACTGGGAGAGGCTTTGCAGCTAAGTCAACCTATTAACAGCAATTCCATTTCAGTTCATATGCCAAGATTTTGCACTCTTCTTCAGCTCAATAAATCTGCTCAGGAACTGGCTACTCACATAGGAGAGGTGGTGATCAACAAGTGCTTCTGCACTCGCAGGAATCCAATTAGCATCTCAGCCGCTGCTATATATCTGGCTTGCCAACTTGAAGACAAACGCAAAACTCAAGCTGAAATTTGTAAGGTAACTGGTCTTACTGAAGTCACTCTCCGAAAGGTGTACAAGGAACTATTAGAGAATTGGGATGATTTGCTTCCCTCGAATTACACCCCAGCCGTTCCTCCTGAGAGAGCATTTCCCACTACTATAATTGCTGCCAGTCGATCTTCAACAGCTAAAGTTGATGCTGTAGAGGTCATTTCATCTTTGGACTCAGAAAAGTTGCCAGAAATTAAACCCAGCAAACCTAATGAGATTTCAGTCATGGTTCACCAGTCCAGAGGAAAGGATGAGGCTGAAGGTAAAAGCAATGTTCGTGCAAGCCATTCCACACTGAATCAACAGTCAACATTTTGGCAATCCCAGCCTCCAAGTGGGACACACAATCATCAGAGTGTTTTACAAGGAATGGATATTGATGGATTGCAGTTTAAACAGCAACATCCTGAACACATGGCAGAGGACACAAATGGTGCTGCTAGCGGTGGCTCTCTAAAATCAAGCCAACTTTGCAGTCCTCCCGCTTCAAGAGCAAGCTCTGTTATGAGGCCGTTCTCAGCTCCCCCTTCATCTGGGCCTTCAAATGTTCGATTAGTTCAGTCACCTAAGATAATGCCGGGTTATCCGGAGCACTGA 1497 0.491 MKCPYCTAAQGRCATTSSGRFITECTSCGRVVEERQSHPHHVFHLRAQDNPLCLVTSDLPLPTLHQNDEDPFEPTGFITAFSTWSLEPSPLYLQSSLSFSGHLAELERTLESSSSSSSSSSSSSSTVVVDNLRAYMQIIDVGSILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTIIAASRSSTAKVDAVEVISSLDSEKLPEIKPSKPNEISVMVHQSRGKDEAEGKSNVRASHSTLNQQSTFWQSQPPSGTHNHQSVLQGMDIDGLQFKQQHPEHMAEDTNGAASGGSLKSSQLCSPPASRASSVMRPFSAPPSSGPSNVRLVQSPKIMPGYPEH* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1011 498 CDD CYCLIN 134 215 IPR013763 -
Apr7g1011 498 MobiDBLite consensus disorder prediction 392 419 - -
Apr7g1011 498 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 495 - -
Apr7g1011 498 SUPERFAMILY Cyclin-like 133 223 IPR036915 -
Apr7g1011 498 CDD CYCLIN 234 312 IPR013763 -
Apr7g1011 498 MobiDBLite consensus disorder prediction 362 419 - -
Apr7g1011 498 SUPERFAMILY Cyclin-like 230 328 IPR036915 -
Apr7g1011 498 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Apr7g1011 498 PRINTS Transcription initiation factor IIB signature 178 197 IPR000812 GO:0006352|GO:0070897
Apr7g1011 498 PRINTS Transcription initiation factor IIB signature 204 219 IPR000812 GO:0006352|GO:0070897
Apr7g1011 498 PRINTS Transcription initiation factor IIB signature 233 251 IPR000812 GO:0006352|GO:0070897
Apr7g1011 498 PRINTS Transcription initiation factor IIB signature 267 283 IPR000812 GO:0006352|GO:0070897
Apr7g1011 498 PRINTS Transcription initiation factor IIB signature 299 313 IPR000812 GO:0006352|GO:0070897
Apr7g1011 498 MobiDBLite consensus disorder prediction 470 485 - -
Apr7g1011 498 Gene3D - 232 328 - -
Apr7g1011 498 MobiDBLite consensus disorder prediction 447 463 - -
Apr7g1011 498 Gene3D - 132 223 - -
Apr7g1011 498 SMART cyclin_7 136 217 IPR013763 -
Apr7g1011 498 SMART cyclin_7 232 313 IPR013763 -
Apr7g1011 498 MobiDBLite consensus disorder prediction 435 498 - -
Apr7g1011 498 Pfam Transcription factor TFIIB repeat 134 215 IPR013150 GO:0017025
Apr7g1011 498 Pfam Transcription factor TFIIB repeat 232 313 IPR013150 GO:0017025
Apr7g1011 498 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 495 IPR000812 GO:0006352|GO:0070897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1011 K03124 - gmx:102662353 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1011 7 17144155 17146717 Apr7g1011 7 17144155 17146717 ECH