Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0760 ATGACGGTTTCTTCTGATAATTGCGTCCAAAGCAGCAAGAGTTCTCTCACCAAACTTGCTCCACTTGAAGCAGTGCTCTTTGATATAGATGGAACACTTTGTGATTCTGATCCGCTCCACTACTATGCTTTCCGTGAAATGCTCCAAGAGATTGGCTTTAATGGAGGTGCTCCTATAACAGAGGAGTTTTTTATTGAGACTGTTGCTGGCAAGCACAATGATGATATTGCCTCGGCTCTCTTTCCTGGTGATCTGCAACGAGGTTTAAAATTTGTGGATGATAAGGAAGCCATGTTCCGAAGATTGGCAGCTGACCAACTGGAAGCTTTGAATGGGCTTGATAAAGTGAGGAAATGGATTGAAACTCATGGGTTGAAGCGAGCTGCAGTTACCAATGCTCCAAGAGCAAATGCAGAACTCATGATCTCAAAACTTGGTCTCTCAGATTTCTTTGATGCTGTTATTATTGGTGGTGAATGTGAACATGCCAAGCCTCATCCAGACCCGTACTTGAAAGCTCTTGAAGCTCTGAAGGCATCGAAGGATCATACATTTGTATTTGAGGATTCTGTTTCTGGGATCAAAGCTGGAGTTGCAGCTGGGATGCCTGTTATTGGTTTAGCTACACGAAATCCAGAAAATTTATTGATGGAAGCAAAGCCTACTTTTCTGATTAAGGATTATGCTGATCCAAAATTGTGGGCTGCTTTGGAAGAACTTGACAAGGCTGGTCCTCGTTAA 741 0.4291 MTVSSDNCVQSSKSSLTKLAPLEAVLFDIDGTLCDSDPLHYYAFREMLQEIGFNGGAPITEEFFIETVAGKHNDDIASALFPGDLQRGLKFVDDKEAMFRRLAADQLEALNGLDKVRKWIETHGLKRAAVTNAPRANAELMISKLGLSDFFDAVIIGGECEHAKPHPDPYLKALEALKASKDHTFVFEDSVSGIKAGVAAGMPVIGLATRNPENLLMEAKPTFLIKDYADPKLWAALEELDKAGPR* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0760 246 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 22 33 IPR006439 -
Apr7g0760 246 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 120 133 IPR006439 -
Apr7g0760 246 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 151 167 IPR006439 -
Apr7g0760 246 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 169 189 IPR006439 -
Apr7g0760 246 Pfam Haloacid dehalogenase-like hydrolase 25 206 IPR041492 -
Apr7g0760 246 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 127 206 IPR006439 -
Apr7g0760 246 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 4 243 - -
Apr7g0760 246 Gene3D - 23 230 IPR023214 -
Apr7g0760 246 Gene3D Putative phosphatase; domain 2 37 105 IPR023198 -
Apr7g0760 246 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 22 230 - -
Apr7g0760 246 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 4 243 - -
Apr7g0760 246 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 22 230 - -
Apr7g0760 246 SUPERFAMILY HAD-like 18 239 IPR036412 -
Apr7g0760 246 CDD HAD_BPGM-like 24 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0760 Apr-Chr7 14582718 14585916 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0760 - - gmx:100802762 447.203