Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0719 ATGACTACATTAGACGAAAGAGCTTCTGCTAAAAGATGGCTTCCTCTCGAAGCTAACCCTGACGTCATAAATCAGTTCCTTTGGGGGCTAGGGCTTCCAGCGGATGAGGCAGAATGTTATGATGTTTATGGCTTAGATGAAGAGCTTCTGGAAATGGTTCCAAAACCTGTTATTGCCGTCCTTTTTCTTTATCCCATAACAACTAAGACTGAAGAGGAGAGGTTGCAGCAGGAAAATGAAAATAGGGAGTATAACAGTAGAGTGTATTTTATGAAGCAAACTGTGGGTAATGCTTGTGGTACAATAGGACTGCTGCATGCTCTTGGCAATTTGACTTCTGAAGTCAAGCTAGTTGAGGGGTCGTTCTTTGATAAGTTCTTTAAATCCACTGCAAGCTTGAATCCATTGCAGCGTGCAGCATTTCTTGAGAATGACAGAGAAATGGAAGTTGCTCACTCAGTGGCAGCAACTGCTGGTGATACAGAGGCGTCAGACAATGCAGATGCTCATTTCATATGCTTTGCTTGTGTGGACGATGAACTGTATGAACTTGATGGAAGAAAGTCAGGGCCAATATCTCATGGTCCATCTTCTGCAAGAACTTTGTTAAGGGATGCAGCTAAAGTTATACAGGGCATGATCCAGAAAAATCCAGACTCCCACAACTTCAATGTCATTGCCTTATGTAAGAAATCCGGGGAATAA 705 0.427 MTTLDERASAKRWLPLEANPDVINQFLWGLGLPADEAECYDVYGLDEELLEMVPKPVIAVLFLYPITTKTEEERLQQENENREYNSRVYFMKQTVGNACGTIGLLHALGNLTSEVKLVEGSFFDKFFKSTASLNPLQRAAFLENDREMEVAHSVAATAGDTEASDNADAHFICFACVDDELYELDGRKSGPISHGPSSARTLLRDAAKVIQGMIQKNPDSHNFNVIALCKKSGE* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0719 234 Coils Coil 67 87 - -
Apr7g0719 234 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 15 32 IPR001578 GO:0004843|GO:0006511
Apr7g0719 234 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 53 65 IPR001578 GO:0004843|GO:0006511
Apr7g0719 234 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 93 110 IPR001578 GO:0004843|GO:0006511
Apr7g0719 234 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 165 176 IPR001578 GO:0004843|GO:0006511
Apr7g0719 234 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 181 191 IPR001578 GO:0004843|GO:0006511
Apr7g0719 234 SUPERFAMILY Cysteine proteinases 11 231 IPR038765 -
Apr7g0719 234 CDD Peptidase_C12_UCH_L1_L3 13 228 - -
Apr7g0719 234 Gene3D - 7 231 IPR036959 GO:0004843|GO:0006511
Apr7g0719 234 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7 231 - -
Apr7g0719 234 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 13 214 IPR001578 GO:0004843|GO:0006511
Apr7g0719 234 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7 231 IPR001578 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0719 Apr-Chr7 14104505 14108345 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0719 K05609 - gmx:100527755 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0719 7 14104505 14108345 Apr7g0719 7 14104505 14108345 ECH