Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0661 ATGGAGAACATAGGAATACTACCATCAACACCAGGGAAGTTGAAGCCAGAGAAGTATCAACACCAACCCTACTACATTCATCGCCTTCGATTATCAAAACTAACACTATGGTCCTCGATATTCCTTGCCTTCATTCTCTTCTTCTTCATCCTCTCCCCTCCCACCGCTCCACCCACCGCCGCCGTCCCTCGCCGCGATTCCTGGGGCGGACCCGACTGGGAAAAGCGCGTCAGCAAATCCGCGCGTAAGAACTCCGCCTCCGGCTTCACCGTCCTCGTCACCGGTGCCGCGGGCTTCGTAGGCTGCCACGTGTCCCTTTCGCTGAAGCGGCGCGGCGACGGCGTTCTCGGCCTCGACAACTTCAACCGCTACTACGACGTGAACCTCAAACGCGCTCGGCAGAAGCTTCTGGCGCGTGCGGGGGTGTTCGTGGTGGAGGGAGACATCAACGATTCCTCACTCCTCCACAAGCTCTTCGATGTGGTACCCTTCACTCACGTGATGCACCTCGCCGCACAAGCCGGTGTTCGCTACGCCATGCAGAACCCCGGTTCGTATGTGCACAGCAACATCGCGGGGTTCGTGAACCTTCTTCAGGTTTGCAAATCGGCGAAACCGCAACCCGCGATTGTGTACGCGTCGTCGAGCTCCGTTTACGGGTTGAACTCGAAAGTGCCATTTTCTGAAAAGGACAGAACGGATCAACCTGCGAGTCTTTATGCTGCGACTAAGAAAGCTGGTGAAGAAATCGCTCACGCCTATAATCATATATATGGTCTTTCGATGACGGGTTTGCGTTTTTTCACTGTTTATGGTCCGTGGGGTCGCCCTGATATGGCGTATTTCTTCTTCACGAAGGATATTCTGAAGGGGAAGCAAATAACGATCTTTGAAGGGCCTGATGGTGGAAGCGTGGCGAGGGATTTTACGTACATTGATGATGTTGTGAAGGGGTGTTTGGGGGCTTTGGATACGGCTAGGAAGAGTACTGGGTCTGGAAATGGAGGGAAGAAGAAGGGTGCTGCGCAGTATAGAATTTATAATCTGGGTAATACTTCGCCGGTGCCTGTGACTGAGCTTGTCAACATATTGGAGAAGCTTCTGAAGGTGAAGGCTAAAAGGAAAGTGATGGCCATGCCTAGGAATGGAGATGTTAAGTTTACTCATGCCAATATTAGCAGAGCGCACAGGGAGCTCGCATACATGCCTACTACTGATTTGGAAGCAGGGCTCAGGAAGTTTGTTCGATGGTACCTTGATTTCTACTCTGTCTCTAAGAACAAGAGTGCTTCGTAA 1296 0.5208 MENIGILPSTPGKLKPEKYQHQPYYIHRLRLSKLTLWSSIFLAFILFFFILSPPTAPPTAAVPRRDSWGGPDWEKRVSKSARKNSASGFTVLVTGAAGFVGCHVSLSLKRRGDGVLGLDNFNRYYDVNLKRARQKLLARAGVFVVEGDINDSSLLHKLFDVVPFTHVMHLAAQAGVRYAMQNPGSYVHSNIAGFVNLLQVCKSAKPQPAIVYASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHAYNHIYGLSMTGLRFFTVYGPWGRPDMAYFFFTKDILKGKQITIFEGPDGGSVARDFTYIDDVVKGCLGALDTARKSTGSGNGGKKKGAAQYRIYNLGNTSPVPVTELVNILEKLLKVKAKRKVMAMPRNGDVKFTHANISRAHRELAYMPTTDLEAGLRKFVRWYLDFYSVSKNKSAS* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0661 431 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 87 424 IPR036291 -
Apr7g0661 431 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 3 429 - -
Apr7g0661 431 PANTHER EPIMERASE-RELATED 3 429 - -
Apr7g0661 431 PRINTS Nucleotide sugar epimerase signature 117 133 - -
Apr7g0661 431 PRINTS Nucleotide sugar epimerase signature 307 322 - -
Apr7g0661 431 PRINTS Nucleotide sugar epimerase signature 344 359 - -
Apr7g0661 431 PRINTS Nucleotide sugar epimerase signature 384 401 - -
Apr7g0661 431 Pfam NAD dependent epimerase/dehydratase family 91 329 IPR001509 -
Apr7g0661 431 Gene3D - 90 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0661 Apr-Chr7 13356142 13358405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0661 1 431 Miscellaneous Gene Families AT4G00110 73.744 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0661 K08679 - gmx:100803127 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0661 7 13356142 13358405 Apr7g0661 7 13356142 13358405 ECH