Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0654 ATGGCTTACGCACCGTCGCCCATGTCGGTTCAACCGGGTCGGATTCGGACCCTTAAAGAAGGTTCGCGCGAAAAAGCGGGTCCCGTTGTGTACTGGATGTTCAGAGATCAACGAGCGATAGACAACTGGGCTCTCATCCACGCCGTTCGTGAGGCCAACAAAGCCAACGTTCCCGTAGCCGTTGTTTTCAATCTCTTCCATAGCTTTCTGGGCGCGAAATCTCGTCATTTAGGGTTCATGTTGAGGGGTTTGCGCCAATTGTGCCACCGCATGCAACACACACTTCATATCCCCTTTTTCTTGTTTCGGGGTGAAGCAGAGGATACTATACCAAAGTTTCTTAGAGAATGTGAAGCTTCACTTTTGGTGACGGATTTCTCACCGTTGCGGGAAGTACGAAAGTGTAAAGAAGAGATTTGCAAGAGGGTAGGCGGTTTTGTTACCGTCCATGAAGTGGATGCTCACAATGTTGTCCCCCTTTGGGTTGCTTCTGATAAGTTGGAGTACAGTGCTAGGACCATAAGGGCTAAGATAAACAAAAGGCTTTCTGAGTATCTCATTGATTTCCCTAACATTGAACTTGAACCCCCAATTAGGAAGTGGGTGGTCACTGACAACCACTCCATTGACTGGGATGATCTCATTGCTGATGTGTTAAGGAGAGGAGCTGAGGTTCCTGAAGTTGAGTGGTGTGAACCTGGGGAAAATGCTGCAATGGAAGTGCTAATGGGAAGTAAAAATGGGTTCTTGACTAAAAGGTTGAAAAATTATTCTGTAGATCGCAACAACCCGTGCAAACCCACTGCACTTTCTGGCTTATCACCCTATTTGCATTTTGGACAGATATCTGCTCAGCGTTGTGCTTTAGAAGCACGTAAGCTGCGAACTTCACACCCTCAGGTATCATGGGAGTGGGCTCGTAAGACCTTGCTCGATCATGCCTCTGATAAACGAGAACATATTTACTCGAGGGAGCAGTTGGAGAAGGCACAGACTGCTGATCCCCTCTGGAATGCTTCTCAGCTGGAGATGGTTCATTATGGGAAAATGCATGGTTTTATGCGAATGTATTGGGCCAAGAAGATACTTGAATGGACACGAGGACCTGAAGATGCCCTTGAGATATCTTTATATTTAAATGATAAGTATGAATTAGATGGGAGAGATCCAAATGGTTATGTTGGCTGCATGTGGTCAATTTGTGGGGTTCATGATCAGGGTTGGCGAGAGAGGCCCATTTTTGGGAAAATCCGATACATGAACTATGCAGGCTGCAAAAGGAAATTTGATGTCGATAAATACATTGCATATGTCAATAAATTAGTTAGTGAGCTGAGAAAGAGAAAGGCTGAAAACTCGCTATCTCGAAAGGAGAAAGTACCACGCCGTTGTGATCCTGAAAACTGA 1407 0.4563 MAYAPSPMSVQPGRIRTLKEGSREKAGPVVYWMFRDQRAIDNWALIHAVREANKANVPVAVVFNLFHSFLGAKSRHLGFMLRGLRQLCHRMQHTLHIPFFLFRGEAEDTIPKFLRECEASLLVTDFSPLREVRKCKEEICKRVGGFVTVHEVDAHNVVPLWVASDKLEYSARTIRAKINKRLSEYLIDFPNIELEPPIRKWVVTDNHSIDWDDLIADVLRRGAEVPEVEWCEPGENAAMEVLMGSKNGFLTKRLKNYSVDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLRTSHPQVSWEWARKTLLDHASDKREHIYSREQLEKAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEDALEISLYLNDKYELDGRDPNGYVGCMWSICGVHDQGWRERPIFGKIRYMNYAGCKRKFDVDKYIAYVNKLVSELRKRKAENSLSRKEKVPRRCDPEN* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0654 468 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 28 212 IPR036155 -
Apr7g0654 468 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 300 449 - -
Apr7g0654 468 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 221 448 IPR036134 -
Apr7g0654 468 Gene3D HUPs 8 154 IPR014729 -
Apr7g0654 468 PANTHER DEOXYRIBODIPYRIMIDINE PHOTOLYASE 8 300 - -
Apr7g0654 468 PANTHER DEOXYRIBODIPYRIMIDINE PHOTOLYASE 300 459 - -
Apr7g0654 468 ProSitePatterns DNA photolyases class 2 signature 2. 402 421 IPR032673 -
Apr7g0654 468 Pfam DNA photolyase 29 191 IPR006050 -
Apr7g0654 468 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 27 160 IPR006050 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0654 K01669 - gmx:100170749 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0654 7 13277013 13280301 Apr7g0654 7 13277013 13280301 ECH