Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0648 ATGTCCGGAACATCAAAGTTAGGAGACAACCTAAGCTCAAACCATAAAACTAACGAATTCCCTTTGCCTCCTCCGTCATTAGAAACCCAAAATTGCATGATGAAGATGGTGCTCACAGAGCTAAGAGTTCAACGAGGAATAGCCCTTCCAATGGTGGCCATGAATTTGGCTTGGTTTGCCAAGACAGCCATCACAACAGCCTTTTTGGGGCGTCTAGGAGATCTCAGCTTAGCAGGTGGCGCTCTCGGGTTCACTTTTGCTAATGTCACTGGCTTCTCTGTCCTCAATGGTCTATGCGGTGCCATGGAACCTATCTGTGGACAGGCTCATGGTGCTAAAAACTTCAGACTCCTTCACAAGACCCTTCTCATGACAGTCTTGTTGTTGCTGTTGGTATCACTTCCCATTACTTTCTTGTGGCTTAATGTTGACAAAATTTTGATTCATTTTGGTCAACAAGAAGACATCTCTGTTGAGGCCAGGACCTATATTTCCTATCTCATACCCGACTTGTTTGTCATCTCACTCTTCTGTCCATTAAAAGCCTACTTGAGCTCTCAAAGCATAACCCTTCCTACCATGTTCAGTTCTGCTGCAGCACTAGCTTTCCACATACCCGTTAACATTGTACTCTCAAAGACCATGGGGATCAGAGGAGTTTCCATGGCGGTTTGGATAACTGATTTTATTGTTGTTGTTCTGCTGGCCATTTATGTTATAATTCTTGAAAACAGAAAGGTAAGCATGTGGAAGGAAGGAGGATGGTGGGATCAGAGGATTGTAGATTGGATTAGGTTGCTCAAGCTGTGTGGATCATGCTGCCTCAATACATGCCTTGAGTGGTGGTGCTATGAGATTCTTGTCTTGCTAACTGGCCACTTGACAAATGCAAAGCAAGCAGTGGGAGTTTTGGCTATTGTGCTAAACTTCGACTATTTGCTCTTCTCAGTGATGCTATCGCTAGCCACTTGTGTTTCCACCCGTGTCTCAAATGAACTTGGTGCCAACCAAGCTGGCCTTGCTTATCGATCAGCGTGTGTGTCTCTAGCATTGGGCTTTGTCTCAGGTTGCATAGGTAGCTTGGTGATGGTGGCTGCCAGGGGAGTTTGGGGCCCCCTCTTTAGCCATGATGGGGGAATCATAAAGGGAGTAAAGAAGACAATGTTGTTGATGGCTCTGGTGGAAGTGTTCAATTTTCCATTGGCAGTTTGTGGGGGCATAGTTCGAGGGACAGCTCGACCCTGGTTAGGTATGTATGCTAATATGGGTGGATTTTATTTTCTGGCCCTGCCACTGGGTGTTGTTCTTGCATTCAAGCTACGACTTGGGCTAGTTGGACTCTTCATTGGACTTCTTACTGGTATCGTTACCTGCTTGACGCTCCTATTGGTATTTATTGCGCGGATAAACTGGGTTAACGAAGCTGCCAAGGCCCAAGCACTAGCCAGCAACGAGCAGGTTAAGGAAATTCCCAAATTTGACGCAGAAAGAACCAATTGA 1500 0.4587 MSGTSKLGDNLSSNHKTNEFPLPPPSLETQNCMMKMVLTELRVQRGIALPMVAMNLAWFAKTAITTAFLGRLGDLSLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNFRLLHKTLLMTVLLLLLVSLPITFLWLNVDKILIHFGQQEDISVEARTYISYLIPDLFVISLFCPLKAYLSSQSITLPTMFSSAAALAFHIPVNIVLSKTMGIRGVSMAVWITDFIVVVLLAIYVIILENRKVSMWKEGGWWDQRIVDWIRLLKLCGSCCLNTCLEWWCYEILVLLTGHLTNAKQAVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQAGLAYRSACVSLALGFVSGCIGSLVMVAARGVWGPLFSHDGGIIKGVKKTMLLMALVEVFNFPLAVCGGIVRGTARPWLGMYANMGGFYFLALPLGVVLAFKLRLGLVGLFIGLLTGIVTCLTLLLVFIARINWVNEAAKAQALASNEQVKEIPKFDAERTN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0648 499 Pfam MatE 50 209 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr7g0648 499 Pfam MatE 273 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr7g0648 499 MobiDBLite consensus disorder prediction 1 25 - -
Apr7g0648 499 PANTHER PROTEIN DETOXIFICATION 56 29 485 - -
Apr7g0648 499 CDD MATE_eukaryotic 40 477 IPR045069 GO:0042910|GO:1990961
Apr7g0648 499 MobiDBLite consensus disorder prediction 1 27 - -
Apr7g0648 499 PANTHER MULTIDRUG RESISTANCE PROTEIN 29 485 - -
Apr7g0648 499 TIGRFAM matE: MATE efflux family protein 50 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0648 Apr-Chr7 13217813 13219428 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0648 K03327 - gmx:100804083 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0648 7 13217813 13219428 Apr7g0648 7 13217813 13219428 ECH