Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0624 ATGATGAAAGGTTCGAAGCGTTTGGCCGTGTCGGAACCCAACCCGCCCGATACCAGCGAAACGACATTCCGGAATAAAAGGATAATGGAAGGGTCCCTCTTTGATTTCCATAGGGCTGAACCTTCCCAACAACCAATGGTGGCAACACCACAATTGGATATGAAACGGGCAGAATCATCACAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGTTGGGTTCAAACACAACTAAAGAATCATCCTGATGAGCTTTGGGAAGACGGTGTCAGAGATTACTTAGATCATGCTTCAAGCATTATGGAAAAATTTAGTGATGTCGTCAACTGGCTCAAAGCAAATGCCACCAAGGCAGAAAATTTGGCTGGTGATGCTGGTGCTTCATTTTCTGGGAAAAAGTTCTCAACTGAAGTAATGAACAAGGAAAATAAATCTTTTGGAGAAAAAACTGGGTCTACTCCTGTTACTGCTGCTACAAATTTTACAAGTTCATGGAGCACTGGAATGTTTTCAAACAGTCAAAATCTTTTTGCATTTGTTTCCCTCTCTCTATTTTTAGGACATCAAACTTCAGCTCCACCTAACAATGAGGCTTCAAATGATGTAGATGGTGAAAATGAATTGGAGCAGCCTAGCAGCCCATCAGTGAAGAAGTCAGAAGAGAAAGGTGTTGTAGTGGTACATGAAGTGAAGTGCAAGCTTTACGTGAAGTCAAGTGATCCAGAAGATAAGGATGTATGGAAAGATAAAGGAATGGGCCAACTGTCAATTAAATGCAAAGAGGGTGTTAGCAAGGCTACCAAAGAGTCTAAACCTACAATTGTTGTTCGAAATGAGGTAGGAAAAATTCTTCTCAATGCCTTGTTGTATCCAGGAATCAAGACAAATATGCAGAAGAATTCTCTTGTTGCAATATTCCATACCTCGGGTAATGCTGATGGAAGCGGTGGAGAAAATGATAGTGTTGTTGCACGTACATTCTTGATCCGGATGAAAACAGAAGATGATCGAAATAAACTGGCTTCAACCATCCAAGAATATGCTCCAGTGTCTTGA 1059 0.4127 MMKGSKRLAVSEPNPPDTSETTFRNKRIMEGSLFDFHRAEPSQQPMVATPQLDMKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVNWLKANATKAENLAGDAGASFSGKKFSTEVMNKENKSFGEKTGSTPVTAATNFTSSWSTGMFSNSQNLFAFVSLSLFLGHQTSAPPNNEASNDVDGENELEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSSDPEDKDVWKDKGMGQLSIKCKEGVSKATKESKPTIVVRNEVGKILLNALLYPGIKTNMQKNSLVAIFHTSGNADGSGGENDSVVARTFLIRMKTEDDRNKLASTIQEYAPVS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0624 352 MobiDBLite consensus disorder prediction 1 24 - -
Apr7g0624 352 Pfam RanBP1 domain 217 347 IPR000156 GO:0046907
Apr7g0624 352 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 4 350 - -
Apr7g0624 352 MobiDBLite consensus disorder prediction 192 222 - -
Apr7g0624 352 CDD RanBD_NUP50 221 349 - -
Apr7g0624 352 SUPERFAMILY PH domain-like 219 349 - -
Apr7g0624 352 Gene3D - 125 351 IPR011993 -
Apr7g0624 352 ProSiteProfiles Ran binding domain type 1 profile. 219 347 IPR000156 GO:0046907
Apr7g0624 352 MobiDBLite consensus disorder prediction 192 214 - -
Apr7g0624 352 PANTHER RAN BINDING PROTEIN 4 350 IPR045255 -
Apr7g0624 352 SMART ranbd_3 209 348 IPR000156 GO:0046907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0624 K14295 - gmx:100816975 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0624 7 12876425 12882170 Apr7g0624 7 12876425 12882170 ECH