Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0597 ATGAACAACTTCAAGCTAGGGGTAGACGTGGTTAGTGCTCACAATCTATTGCCAAAAGATGGACAAGGTTCATCCAGTGCCTTTGTAGAAATTTACTTTGATGGCCAAAAGTTCCGCACGACCATCAAAGAGAGGGATCTTAACCCGGTTTGGAATGAGAGCTTCTACTTCAATATATCTGATCCTTCCAATCTTCACTATCTCACTCTTGATGTCTATGTCCACAGCCATGCCAAAGCTACTAACTCCACTTCATTTCTTGGCAAGGTTAGCCTTACTGGGACTTCTTTTGTTCCCTACCCTGATGCAGTTGTCTTGCACTATCCATTGGAAAAGCGTGGTATTTTCTCTCGTGTGAGAGGAGAGATTGGCCTTAAAGTTTACGTTACTGATGACCCAACCATAAAATCCTCAATTCCAATTCGTGCTGTTGAGTCGATACCGACAGATAATCCTAGCTTAACACATGCAGAAGTTCAAGCACCTGCGAAGGCAATGACGAACACTTTGCCTAGTGAAAAGGTTCAGTCACGACACACATTTCATCATCTTCCTAACACAAACCACCACCGGCACCAACACCAATCCTCTGGCTTTGCAGATACTCATTATGTAACAAAGTATGAAGCTGATGAAATGAAATCTGAACCACAGCCTATGAAGCTAGTACGCATGCACTCTGCTACATCAGTACAACCAGTTGATTTTGCACTTAAAGAAACAAGCCCATTTCTTGGTGGGGGAAGAGTTGTTGGGGGTCGCGTTATTCATAAAGACAAAACTGCAAGTACATATGATCTTGTGGAAAGGATGTATTTTCTGTATGTTAGAGTTGTCAAGGCTCGTGAGCTTCCTGCTATGGATGTTACTGGGAGTCTTGATCCATTTGTTGAGGTGAGAATTGGAAATTACAAAGGTATTACTAAACACTTTGATAAGAACCAGAGTCCTGAGTGGCACCAGGTGTTTGCCTTTTCAAAGGACCGGATGCAAGCATCTGTACTAGAAGTTGTGATAAAGGACAAGGATCTCATCAAAGATGATTTTGTAGGCATTGTGAGGTTTGACATCAATGAGGTTCCCTTGAGAGTACCGCCTGATAGTCCTTTAGCACCAGAGTGGTACCGCCTTGAGGATAAGAAAGGGGAGAAGATTAAAGGTGAATTGATGCTTGCTGTCTGGATTGGTACTCAAGCAGATGAGGCTTTTTCTGATGCATGGCATTCAGATGCGGCCATACCTGTTGACAGCACGCCTGCTATCTCTGCAGTTATGCGTTCAAAGGTATATCATGCTCCAAGGTTATGGTATGTGCGTATCAACGTTGTGGAGGCACAAGACTTGGTTCCTACAGAGAAAAATCGCTTTCCTGATGTGTATGTCAAGGTGCAGATAGGAAACCAAGTGCTGAAGACAAAAACAATTCCAGCCAGAACTCTAAGTGCCCTGTGGAATGAGGATCTTTTGTTTGTTGCTGCAGAACCTTTTGAAGATCATTTAATAATTTCAGTTGAAGATCGGGTTAGTCCTGGAAAAGATGAGATCATTGGGAGGATCATCATACCACTGAACTCTGTGGAGAGGCGTGCGGATGATAGAATCATTCATTCTCGATGGTTCAACCTGGAAAAGCCAGTTGCTGTGGATGTTGATCAGTTGAAGAAAGAAAAGTTCTCAAGTAGAATTCAGCTCCGTCTATGTCTTGATGGAGGATATCATGTTCTTGATGAGTCAACACATTACAGCAGTGATCTCCGCCCCACAGCAAAGCAGCTGTGGAAGCCACCAATTGGTGTTTTAGAACTCGGAGTGCTGAACGCTGTAGGACTTCACCCAATGAAAACAAGGGATGGTAGGGGCACATCTGATACATACTGTGTAGCAAAATATGGTCATAAATGGGTCAGAACTAGGACAATTGTTGATAATATGTCTCCAAAATACAATGAGCAATACACTTGGGAGGTTTTTGATCAAGCCACAGTTCTTACAGTAGGTGTCTTTGACAACAGCCAGATCGGGGAAAAGGGTAATGCTTCAAAGGACTTGAAAATTGGGAAGGTCAGAATTCGCATCTCAACTCTGGAAACAGGCAGGATTTACACTCACTCGTATCCATTACTGGTTCTTCACCCAACTGGTGTTAAGAAGATGGGTGAACTTCACTTAGCAATACGGTTTTCATGCACTTCTTTTGCAAACATGCTTTATCTATACTCACGACCACTGCTACCAAAAATGCACTACGTAAGGCCTTTCTCTGTCATGCAACTTGACATGCTACGTTACCAAGCAGTGAACATAGTGGCTGCACGACTTGGCCGAGCAGAGCCACCACTTCGTAAGGAAGTGGTGGAATACATGTCAGATGTGGACTCTCACCTGTGGAGCATGCGGCGAAGCAAGGCGAATTTCTTCCGGCTGATGACAGTGCTCTCTGGAGTATTTGCAGTTGGGAAGTGGTTGGGTGATATCTGCATCTGGAGGAATCCGATTACAACAGTGCTGGTTCATGTGCTCTTCCTCATACTTGTTTGCTTTCCAGAATTGATTTTGCCCACTATTTTTCTCTACATGTTTTTGATAGGAGTATGGAACTTCAGATACCGACCCAGATACCCTCCTCACATGAACACAAGAATCTCACAAGCTGAAGCAGTGCATCCAGATGAGTTAGATGAAGAGTTTGACACTTTCCCCACAAACCGAAGCCCAGACCTCGTGAGAATGAGATATGACCGTTTAAGGAGTGTGGCTGGAAGAATTCAAACAGTGGTAGGTGATTTGGCGAGCCAGGGAGAGAGGATTCAAGCATTGTTAAGCTGGAGAGATCCACGTGCTACAGCTATCTTCATTACATCTTGTCTCCTATCTGCATTGGTATTGTATGTTACTCCTCTTCAAGCTGTGGCTGGTTTGGCAGGCTTCTACATCATGAGACATCCAAGATTTCGCCACAGGCTCCCATCTGCCCCAATCAATTTTTTCCGTCGCCTGCCTGCAAGAACAGACAGTATGTTGTAG 3024 0.4408 MNNFKLGVDVVSAHNLLPKDGQGSSSAFVEIYFDGQKFRTTIKERDLNPVWNESFYFNISDPSNLHYLTLDVYVHSHAKATNSTSFLGKVSLTGTSFVPYPDAVVLHYPLEKRGIFSRVRGEIGLKVYVTDDPTIKSSIPIRAVESIPTDNPSLTHAEVQAPAKAMTNTLPSEKVQSRHTFHHLPNTNHHRHQHQSSGFADTHYVTKYEADEMKSEPQPMKLVRMHSATSVQPVDFALKETSPFLGGGRVVGGRVIHKDKTASTYDLVERMYFLYVRVVKARELPAMDVTGSLDPFVEVRIGNYKGITKHFDKNQSPEWHQVFAFSKDRMQASVLEVVIKDKDLIKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKIKGELMLAVWIGTQADEAFSDAWHSDAAIPVDSTPAISAVMRSKVYHAPRLWYVRINVVEAQDLVPTEKNRFPDVYVKVQIGNQVLKTKTIPARTLSALWNEDLLFVAAEPFEDHLIISVEDRVSPGKDEIIGRIIIPLNSVERRADDRIIHSRWFNLEKPVAVDVDQLKKEKFSSRIQLRLCLDGGYHVLDESTHYSSDLRPTAKQLWKPPIGVLELGVLNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTIVDNMSPKYNEQYTWEVFDQATVLTVGVFDNSQIGEKGNASKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTSFANMLYLYSRPLLPKMHYVRPFSVMQLDMLRYQAVNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTVLSGVFAVGKWLGDICIWRNPITTVLVHVLFLILVCFPELILPTIFLYMFLIGVWNFRYRPRYPPHMNTRISQAEAVHPDELDEEFDTFPTNRSPDLVRMRYDRLRSVAGRIQTVVGDLASQGERIQALLSWRDPRATAIFITSCLLSALVLYVTPLQAVAGLAGFYIMRHPRFRHRLPSAPINFFRRLPARTDSML* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0597 1007 CDD C2A_MCTP_PRT_plant 5 131 - -
Apr7g0597 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 136 IPR035892 -
Apr7g0597 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 598 735 IPR035892 -
Apr7g0597 1007 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1007 - -
Apr7g0597 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 436 589 IPR035892 -
Apr7g0597 1007 ProSiteProfiles C2 domain profile. 415 540 IPR000008 -
Apr7g0597 1007 ProSiteProfiles C2 domain profile. 581 705 IPR000008 -
Apr7g0597 1007 CDD C2B_MCTP_PRT_plant 273 397 - -
Apr7g0597 1007 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1007 - -
Apr7g0597 1007 CDD C2C_MCTP_PRT_plant 437 587 - -
Apr7g0597 1007 ProSiteProfiles C2 domain profile. 255 375 IPR000008 -
Apr7g0597 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 272 413 IPR035892 -
Apr7g0597 1007 Gene3D C2 domain 255 395 IPR035892 -
Apr7g0597 1007 Gene3D C2 domain 582 729 IPR035892 -
Apr7g0597 1007 Gene3D C2 domain 418 568 IPR035892 -
Apr7g0597 1007 Pfam Plant phosphoribosyltransferase C-terminal 852 1007 IPR013583 -
Apr7g0597 1007 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Apr7g0597 1007 Gene3D C2 domain 1 130 IPR035892 -
Apr7g0597 1007 CDD C2D_MCTP_PRT_plant 599 724 - -
Apr7g0597 1007 Pfam C2 domain 599 707 IPR000008 -
Apr7g0597 1007 Pfam C2 domain 274 368 IPR000008 -
Apr7g0597 1007 Pfam C2 domain 5 93 IPR000008 -
Apr7g0597 1007 Pfam C2 domain 436 541 IPR000008 -
Apr7g0597 1007 SMART C2_3c 5 106 IPR000008 -
Apr7g0597 1007 SMART C2_3c 273 369 IPR000008 -
Apr7g0597 1007 SMART C2_3c 599 704 IPR000008 -
Apr7g0597 1007 SMART C2_3c 437 535 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0597 Apr-Chr7 12489915 12492938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0597 178 1007 Lipid Metabolism Gene Families AT4G11610 79.693 0.0 1420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0597 - - gmx:100777951 1903.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0597 7 12489915 12492938 Apr7g0597 7 12489915 12492938 ECH