Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0593 ATGGTGAATCGACGCTTCACTCAGGTGGCCACCAGCGACGATGAGGACGAAGCACCGCCTCAGCCGCGCACGCGAAAGAGGATGAAGCTTCTCGAAGAAGATAACGACAACGACAACGATAACGGTGACGAGACGAGGAAGGAAGGAGCGAAACCGGAACCGCCTCAGGTTCCAGATGACGCTAAACCCATTGGCGATCCCGTTAGGGTTTCGGGAAAAGGAAGAGGCAGAAAGAAGCACTTCGAATTCTTCGAGTTCGATGGCAATCAATATACTCTCGAGGACCCTGTTCTTCTCGTTCCTGAGGATACATGTCAAAAGCCATATGTCGCAATTATTAAGGATATTACGCAGTCGAATAACAGCAGCTTAATGTTGACGGGGCAGTGGTTCTATCGCCCTGAAGAAGCTGAGAAAAAAGGTGGTGGAAACTGGCAATCGCGTGATACGAGGGAACTGTTTTATAGTTTCCACCGTGATGAGATTCCTGCTGAGTCTATTATGCACAAGTGTGTGGTGCATTTTGTTCCCATACACAAACAGCTTCCAGATCGTAAGCAGCATCCTGGGTTTATAGTACAGAAGGTGTATGACACTGTGGAAAGAAAGCTCTGGAGGCTAACCGATAAGGACTATGAGGATATTAAGCAGCGAGAAATTGATGAGCTTGTTCAGAAGACTCTGCAACGTATGGGTGAGCTACTTGACATTGAGCCTGAAGAAGCCCCTGCTGATGAGGAGGACCAAACGAAAAATAAAAAGGGCTTGAGGAGAAAGAGCGTTTCACCCCTTGATGTTTCTAGGGAGGAGGAAGAAACTCCTAGGATAGAACAACATCCAAAGCCTGAAACACCAGGGAGCTGTGGAAATAATACCTCAGAGCATTATCGTATATTGGTAGATTTCAATGCACTAACTGGAGATAACCATCGTGACAGATGGTTGGAGAGGTTGCTTCAACACATTAAGTACATGTGTAGTTCTAATGATAGCATAGGAAGAGGCAAAGGATTAGAAAATGGCAATTCTGATGAAATCAACTATGAAAGCAAGAATGGTAGTTCAGAATCAGTAAATGACTGTCAAGACAAGGGTCAGAAGAGTTCCAAGTCTTTTATCTGGCCAGATGCTGCTGTTTCAGCTGTAGTTGCTCTGGAAAAAGCTTCGCATGATTCTCTCTCATCAGATTCAACGAAGTACAACCAAAAGTTGCGACAATTAGATTTTAATCTCAAGAAAAATGCAGTGTTAGCACGCCGTCTATTAAATGGAGAGTTGGAACCTTCGAAAATATTAAATATGACACCGAATGAATTAAGGGAGGGTTTGACTGCTGAGGAAAAAACCAAGGAGGAACCTGCTGAGTCTCAGCACATGCAAATGACAGATGCCCGCTGCTCAAAATGCATGGATTGTAAGGTGGGCTTGAGGGAGATTATCCAAGCTGGAAATAGCGACCGTTATCAGCTGGAATGTGTTGCTTGTGGTCACTCCTGGTATGCCTCCCGGGATGAGGTGTCTATGCCGACAATAGATGGATCAGATTCAAAGAGAAAAACATAG 1563 0.4504 MVNRRFTQVATSDDEDEAPPQPRTRKRMKLLEEDNDNDNDNGDETRKEGAKPEPPQVPDDAKPIGDPVRVSGKGRGRKKHFEFFEFDGNQYTLEDPVLLVPEDTCQKPYVAIIKDITQSNNSSLMLTGQWFYRPEEAEKKGGGNWQSRDTRELFYSFHRDEIPAESIMHKCVVHFVPIHKQLPDRKQHPGFIVQKVYDTVERKLWRLTDKDYEDIKQREIDELVQKTLQRMGELLDIEPEEAPADEEDQTKNKKGLRRKSVSPLDVSREEEETPRIEQHPKPETPGSCGNNTSEHYRILVDFNALTGDNHRDRWLERLLQHIKYMCSSNDSIGRGKGLENGNSDEINYESKNGSSESVNDCQDKGQKSSKSFIWPDAAVSAVVALEKASHDSLSSDSTKYNQKLRQLDFNLKKNAVLARRLLNGELEPSKILNMTPNELREGLTAEEKTKEEPAESQHMQMTDARCSKCMDCKVGLREIIQAGNSDRYQLECVACGHSWYASRDEVSMPTIDGSDSKRKT* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0593 520 MobiDBLite consensus disorder prediction 330 366 - -
Apr7g0593 520 MobiDBLite consensus disorder prediction 9 55 - -
Apr7g0593 520 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 518 - -
Apr7g0593 520 MobiDBLite consensus disorder prediction 1 74 - -
Apr7g0593 520 Pfam BAH domain 90 204 IPR001025 GO:0003682
Apr7g0593 520 CDD BAH_plant_3 71 217 - -
Apr7g0593 520 ProSiteProfiles BAH domain profile. 89 208 IPR001025 GO:0003682
Apr7g0593 520 SMART BAH_4 89 208 IPR001025 GO:0003682
Apr7g0593 520 MobiDBLite consensus disorder prediction 246 279 - -
Apr7g0593 520 Pfam Transcription factor S-II (TFIIS), central domain 306 458 IPR003618 GO:0006351
Apr7g0593 520 SUPERFAMILY Elongation factor TFIIS domain 2 305 440 IPR036575 GO:0006351
Apr7g0593 520 SMART mid_6 344 449 IPR003618 GO:0006351
Apr7g0593 520 MobiDBLite consensus disorder prediction 236 292 - -
Apr7g0593 520 Gene3D - 338 441 IPR036575 GO:0006351
Apr7g0593 520 Gene3D - 3 197 IPR043151 -
Apr7g0593 520 ProSiteProfiles TFIIS central domain profile. 310 467 IPR003618 GO:0006351
Apr7g0593 520 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 518 - -
Apr7g0593 520 MobiDBLite consensus disorder prediction 343 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0593 Apr-Chr7 12451000 12454723 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0593 - - gmx:100788457 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0593 7 12451000 12454723 Apr7g0593 7 12451000 12454723 ECH