Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0570 ATGTCAACGGCTATGGCGGCATCTTCCTTTACAACAACTTCCACCCTCTTCCCGTTCAGAACTACTCCTAAATCCTCTCATCTATTTGCTTTTCCTTGCAAACAGCTTACCCACCTTCCCAACCTCCATCTCAGACCCGTCTCAGCCTCAGCAGGTTCATCTTCAACCACATCCATCCAAATCGACAAATTCCCGGTCTCCGTCACACCCTCGAAGGCTCTTCCCTTTCGGGTCGGGCACGGTTTTGACCTCCATCGACTAGAACCCGGTTACCCCTTAATCATCGGTGGAATTAACATACCCCACGATAGAGGTTGCGAGGCTCATTCCGACGGGGATGTTCTGCTTCACTGCGTGGTCGATGCTATTTTAGGGGCGTTGGGTCTTCCTGATATAGGGCAAATATTTCCGGATTCAGATCCTAAGTGGAAGGGTTGTGCCTCTTCGGTGTTCATCCAAGAATCTGTGAGACTTATGCATGAGGCAGGTTATGAAATTGGAAACTTAGATGCTACATTAATACTTCAGAGGCCAAAATTAAGCCCACACAAGGATGCTATCAAGGCCAACTTATCTGCACTGCTTGGAGTGGACTCTTCTGTAGTAAATATAAAAGCAAAAACTCATGAAAAGGTTGACAGCCTTGGAGAAAATAGAAGTATAGCAGCTCACACAGTGGTTCTTCTAATGAAGAAATGA 699 0.4649 MSTAMAASSFTTTSTLFPFRTTPKSSHLFAFPCKQLTHLPNLHLRPVSASAGSSSTTSIQIDKFPVSVTPSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGCASSVFIQESVRLMHEAGYEIGNLDATLILQRPKLSPHKDAIKANLSALLGVDSSVVNIKAKTHEKVDSLGENRSIAAHTVVLLMKK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0570 232 TIGRFAM ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 77 231 IPR003526 GO:0008685|GO:0016114
Apr7g0570 232 Pfam YgbB family 76 229 IPR003526 GO:0008685|GO:0016114
Apr7g0570 232 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC 1 232 IPR003526 GO:0008685|GO:0016114
Apr7g0570 232 Hamap 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 76 231 IPR003526 GO:0008685|GO:0016114
Apr7g0570 232 ProSitePatterns 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 110 125 IPR020555 GO:0008685
Apr7g0570 232 Gene3D - 73 232 IPR036571 GO:0008685|GO:0016114
Apr7g0570 232 SUPERFAMILY IpsF-like 75 231 IPR036571 GO:0008685|GO:0016114
Apr7g0570 232 CDD MECDP_synthase 77 229 IPR003526 GO:0008685|GO:0016114
Apr7g0570 232 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE 1 232 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0570 K01770 - gmx:100306378 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0570 7 12148842 12151894 Apr7g0570 7 12148842 12151894 ECH