Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0567 ATGGGGTACTATTTGGTTGTGAGTGGTGTGTTCTTCTTGTGTGCCATGGTTAGTCACAATGGACTAGCCATGATGGATGAGAAGTTAACTGGTTCCTCAGCTAATTATGACTATGCAGATGCTCTTGGCAAAGCCATCTTGTTTTTTGAAGGACAACGCTCAGGGAAGTTGCCCACCAGCCAACGAGTCAAGTGGAGGGGGGACTCGGCTCTCTCTGATGGCAAACTTCAAAACGTGAATTTGATTGGAGGATACTATGATGCTGGTGATAATGTCAAGTTTGGATGGCCAATGGCATTTACAGTCAGCTTATTGAGTTGGGCTGTTGTTGAGTATGAGAATGAGATATCTTCGGTGAAGCAACTTGGCAATCTCCACACTGCTATCCGCTGGGGCGCAGACTTCATATTGCAAGCCCACACTTCCCCAACCACGCTCTATACGCAGGTGGGGGATGGAAACGCAGATCACCAATGTTGGGAGCGCCCGGAAGACATGGATACACCAAGAACAGCCTACAAGATCGATGCTAATTCCCCAGGAACTGAAGCTGCAGCTGAGTCTGCTGCTGCTCTATCTGCTGCTTCAGTTGTCTTCAAGAAAATAGATGCCAATTATTCCTCCACGCTGTTAAGCCATTCAAAATCACTGTTTGATTTTGCAGATAAGCATCGAGGCTCTTACTCGGGTTCTTGCCCATTCTATTGCTCGTACTCAGGTTACCAGGATGAACTGTTATGGGCTGCTTCTTGGCTATACAAGGCCAGTGGAGAAAGCAAGTACTTGAGCTACACCATAGGAAACCAAGGTTGGAATCAGGCAGTGTCTGAATTCAGCTGGGATAACAAATTTGTTGGAGCTCAGACATTACTAACGGAGGAATTCTATGGTGGGAAGAAAGATTTAGCCAAGTTTAAGAGTGACGCTGAATCATTCATATGTGCAGTGATGCCCGGAAGTAGCTCTCTACAGATTAGAACAACACCTGGTGGGCTTCTGTTTACTAGAGACAATAGTAATCTGCAATATGTCACGAGCTCCACCATGGTGCTATTCATTTTCTCTAAAATCCTAAACAAATATCATATTGATGGAGTCAATTGTGGCTCGGCGCATATCACCCCTTCTGAAATTAGAGCCTTTGCAAAAACCCAGGTGGACTACATACTAGGAAACAATCCCATGAAGATGTCTTACATGGTGGGATTTGGGAGTAAATACCCTAAACAATTACACCACAGAGGCTCATCCATCCCTTCGATCAAAGTTCATTCGGCCAAGGTGGGTTGCAATGATGGTCTCTCGGAGTATTACTCTTCTGCTAATCCAAATCCCAATACTCATGTGGGTGCCATTGTTGGAGGCCCCAATTCAAATGACCAATTCAGTGATGCAAGATCTGACTATTCTCACAGTGAACCTACCACCTATATGAATGCTGGTTTCGTGGGTTCAGTGTCCCCTTTGCTTGGTGAAACGACCCAAACCAAACCAAGGACACTGCAGTTTCCCCAGATAGATGGTAGGGAGATTAATCAAGCTGATTAA 1548 0.4535 MGYYLVVSGVFFLCAMVSHNGLAMMDEKLTGSSANYDYADALGKAILFFEGQRSGKLPTSQRVKWRGDSALSDGKLQNVNLIGGYYDAGDNVKFGWPMAFTVSLLSWAVVEYENEISSVKQLGNLHTAIRWGADFILQAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTAYKIDANSPGTEAAAESAAALSAASVVFKKIDANYSSTLLSHSKSLFDFADKHRGSYSGSCPFYCSYSGYQDELLWAASWLYKASGESKYLSYTIGNQGWNQAVSEFSWDNKFVGAQTLLTEEFYGGKKDLAKFKSDAESFICAVMPGSSSLQIRTTPGGLLFTRDNSNLQYVTSSTMVLFIFSKILNKYHIDGVNCGSAHITPSEIRAFAKTQVDYILGNNPMKMSYMVGFGSKYPKQLHHRGSSIPSIKVHSAKVGCNDGLSEYYSSANPNPNTHVGAIVGGPNSNDQFSDARSDYSHSEPTTYMNAGFVGSVSPLLGETTQTKPRTLQFPQIDGREINQAD* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0567 515 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Apr7g0567 515 SUPERFAMILY Six-hairpin glycosidases 35 496 IPR008928 GO:0005975
Apr7g0567 515 PANTHER ENDO-1,4-BETA-GLUCANASE 5 498 - -
Apr7g0567 515 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 462 480 IPR033126 -
Apr7g0567 515 Gene3D - 32 502 IPR012341 GO:0005975
Apr7g0567 515 Pfam Glycosyl hydrolase family 9 38 484 IPR001701 GO:0004553|GO:0005975
Apr7g0567 515 PANTHER ENDOGLUCANASE 18-RELATED 5 498 - -
Apr7g0567 515 MobiDBLite consensus disorder prediction 452 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0567 Apr-Chr7 12114609 12117911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0567 37 490 Glycoside Hydrolase AT4G23560 71.806 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0567 - - gmx:547834 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0567 7 12114609 12117911 Apr7g0567 7 12114609 12117911 ECH