Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0562 ATGGTGGAAATGAACTCTTCGTCGGCGATGCTACCGCCACCAGATCCCGCGGCCTTCACTGGAACCGGAAACCAGATATCGCCATCGATCGTGAACGCGTATAGAATCAACAAAGTCTTGGACAATTTGGTTTTGTTTGTTCAACCTGGCAACCGACGCGACCCTTACGAATTTTATTGCAATTGCCTCTCCCTCTCTCGAGGTATCGATTATGCACTTGCCAATGGAGAAACTCCTGCCAGAGCTCATGATCTGCCTAGATTGATGAAACAGATTTGTCAACAAAAGAGCGATGAATTATTGCAAGCAGCTATAATGGTTTTGATGATCTCTGTGAAGAGTGCCTGTGAAATTGGATGGTTCCAGACAAAAGAGTCAGAAGAACTTATTACTATTGCTGATGAGATAGGAAAGGTCTACAGCAGCTTGGGAAGCATAAATGCTGGACCTAGTTCTTGCAATTCCTCAATATTGACAATAATGGAGAGGTTCTATCCAAAGATGAAGTTTGGTCCGATACTTGCATCAATTGAAGCCAAGCCTGGATATGGAGCTTCTGCTATTGACTTCCATATTACAAAGAGTAAAGCTCTAAGAGATAAAATTTTTTTATTGGTTGCGCAAACTGATAACATTGAGACATCTGCATGCCTCATTAGTCCTCAGCAAGTGAATTTTCTCCTCAATGGGAAAGGAGTAATCAATAGGAATAATGTTCAAATGGACCCTGGACCACAAATGCCAACTAATGTGAATGGTATGCTTAAATATGGGACAAATCTTCTTCAAGCTGTGGGCCAGTTCAATGGTCATTATGTTATACTTGTTGCCTATATGAGTGTTAAATCCTTGCCTGAGCATCCAGTTCTTCAGGATTATTTTCAGCCTGCTGTTACCTCTATTGATTCAGATATTATTGAGGGGCCATCACAAATTTCACTTAATTGTCCCATAAGCTTTACTCGAATCAAGATTCCTGTTAAAGGGCATTCATGCAAACATTTCCAGTGTTTTGACTTTGACAACTTCATTAATATGAATTCGAAGAGGCCATCCTGGCGCTGCCCTCATTGCAATCAGTATGTCTGTTATGCAGATATTCGTCTTGACCGAAACATGGTTGAGATCCTGAAAAATGTTGGTGAGAACATTACCGAAGTATTTGTCCTTGCTGATGGATCATGGAAGGCAGTTTTGGAGAAGGATCATGATGCAGATAAGATGCAGAATAAGGGCCACAATTGTGAAAAGGAACAAACAGCTCAACAAGAATCTACTTGCTCCCCTAGTACTGTTCCCAGTGTTCTTGACCTCACCAAAGATGATGATCATTTGGAGACAATGGACTCTTGTGAAATGACAGATAGAAAACCTTTCCGGGCACCTGTTCTTGGTCAGTTTGTAACCCCAGTTTCTACTTGCTTGGGTATGAACTCTGCTACTGTTAATCAAAATATTGCCACTCAAGTTCATACTGCCCGAGGTAGGTCTGACACCCCAATGTTTGGTGTGTCTGATGGTCCTGTTCTGCTCAATACAACAGCACATGCATGTCATCAGGAATCTGAGGGTCATGACAATAACACTGTTGTCAACTCTTCCATGCATAATCAATTTTCTGCACCAAACAATTTGCCGATGCAGTTGAGCTATCTGAATCCAGTTAACGAGTATGGGAGGTCGTCCACAGTGCCAAGAAATATTAATAGGACTCAACCAGCTGTTCAGGCCCTCCCAGCTCAACCTCAGGCATTGGGAGCACAGCAAAATTCAATAACTAATTTCAATAACTCCTTGCTACCCAGCAGTTCCTCTGCTACCCATATTTCTTTGTCCAACCCAGCCCCGAGAGATAGTTTCAATGCCTTGCTAAGTGATACAGAAAGACAGCAGCATTTTTCTCGACCCCCTATGAATCTGCCTCAGGTCTCAGGTGTAAATTCACCTGCTTTTCAGCATCAAACAGTAACGCAGAGCCCATTCAGACCACATGGTTCGTTGACTGATTTTAGCAATCCACACCTGCATCAAGCTTTGAATTCCCGGTCACACATGGCAAAGCGATCATCAAATACGCAAAGGTCCCACATTCAGCAAGGCGGTTCACAATCTGGGATGATTCAGGCGCCTGTGGCTGCTGCAATTAACCTACAAAACAGAGTTATTCCTTCTGCATCGGCTTCCAGACAGGGTAGTTCCCAAGCTAGGACTGCTCAAACAGCTGGAGCTACTACACATAACCATCAAGATAGGGTTATGTATCCTACCCAGGCCACCAGACAGTCGCCATCTGTTTCAGTTCAAAATCAAACCACCGTAGCGGGCACATCCTTTGCAACTTGCATCCCGGGGTTGACAGGAGCACAAAGAGCAAATCCAGCAAAGTCTGTTTGTAGGCCTGATGAGTACTTCAATTTGCAATCAGGACAGAATCGGCCTCCTCCACGAATGCGCGGAAGTATAGATATAACGGACGTAAATGAATCAATTACGCAGCGAATAATTACGCCAACACAACCAGTTCAAAGTTCAAGGCCACAAGCTTCACAACAAGTTCCAAGTTCAAGGCCACAAGGTTCACAACCAATGCGACCAACCAGTGGGATAAGCCGATTGGATGCGCTTAATGCAAACATAAATGCCCATAATTCTTCGAGTAGATAA 2664 0.4354 MVEMNSSSAMLPPPDPAAFTGTGNQISPSIVNAYRINKVLDNLVLFVQPGNRRDPYEFYCNCLSLSRGIDYALANGETPARAHDLPRLMKQICQQKSDELLQAAIMVLMISVKSACEIGWFQTKESEELITIADEIGKVYSSLGSINAGPSSCNSSILTIMERFYPKMKFGPILASIEAKPGYGASAIDFHITKSKALRDKIFLLVAQTDNIETSACLISPQQVNFLLNGKGVINRNNVQMDPGPQMPTNVNGMLKYGTNLLQAVGQFNGHYVILVAYMSVKSLPEHPVLQDYFQPAVTSIDSDIIEGPSQISLNCPISFTRIKIPVKGHSCKHFQCFDFDNFINMNSKRPSWRCPHCNQYVCYADIRLDRNMVEILKNVGENITEVFVLADGSWKAVLEKDHDADKMQNKGHNCEKEQTAQQESTCSPSTVPSVLDLTKDDDHLETMDSCEMTDRKPFRAPVLGQFVTPVSTCLGMNSATVNQNIATQVHTARGRSDTPMFGVSDGPVLLNTTAHACHQESEGHDNNTVVNSSMHNQFSAPNNLPMQLSYLNPVNEYGRSSTVPRNINRTQPAVQALPAQPQALGAQQNSITNFNNSLLPSSSSATHISLSNPAPRDSFNALLSDTERQQHFSRPPMNLPQVSGVNSPAFQHQTVTQSPFRPHGSLTDFSNPHLHQALNSRSHMAKRSSNTQRSHIQQGGSQSGMIQAPVAAAINLQNRVIPSASASRQGSSQARTAQTAGATTHNHQDRVMYPTQATRQSPSVSVQNQTTVAGTSFATCIPGLTGAQRANPAKSVCRPDEYFNLQSGQNRPPPRMRGSIDITDVNESITQRIITPTQPVQSSRPQASQQVPSSRPQGSQPMRPTSGISRLDALNANINAHNSSSR* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0562 887 ProSiteProfiles Zinc finger SP-RING-type profile. 301 382 IPR004181 GO:0008270
Apr7g0562 887 SUPERFAMILY RING/U-box 312 387 - -
Apr7g0562 887 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 398 IPR013083 -
Apr7g0562 887 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 32 459 - -
Apr7g0562 887 MobiDBLite consensus disorder prediction 836 887 - -
Apr7g0562 887 CDD SP-RING_PIAS_like 313 360 - -
Apr7g0562 887 Pfam MIZ/SP-RING zinc finger 312 360 IPR004181 GO:0008270
Apr7g0562 887 PANTHER E4 SUMO-PROTEIN LIGASE PIAL2-LIKE 32 459 - -
Apr7g0562 887 MobiDBLite consensus disorder prediction 724 750 - -
Apr7g0562 887 MobiDBLite consensus disorder prediction 681 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0562 Apr-Chr7 12068758 12077321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0562 K04706 - gmx:100780539 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0562 7 12068758 12077321 Apr7g0562 7 12068758 12077321 ECH