Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0552 ATGCACTCGCACCACTCCCACCCCTTACTACGCCCACAAGTGACCCCTTCTTCTTTTCCCAAACCATTTCCCTCTTCGTTTCTTCTTCTTCTTCCTTCCACTTTCTGCTCCAAGACATTGCGTTCCTCAACTCTCTCTTCTTCCCCAATTCTCCAAAATGAAACCAAATTGCGTATGTTCCTTTCAAAGGACTCTCCTCCTTGCTGCAATCCACCATCGCGTTTTGAAATTGATGAGCTCAGGGGCACAGGGAGATTCACTCGTTCTTTCAAGAATTGCAACAATTCGCCTGAATCAGTTGCTTACAACTCCAATCGAGAATGTCACTTAGCTCCACCTCTTGTTTCTTCTGCTCTCAAGTTTATGCTGTTCTTCGGCTTCCTCACACTTCAGGACTCTTCTCCTGCTGTTGCTGCTTCTGACTTTTCCAGTGGTTTGAATTCGTTCCCTTTCTTTGGGGATATTGGTGACATAAGCACAGGTTTTGCTTCAGCTTTTCTGCTGATATTTTTCTCTGAACTGGGAGACAAGACCTTTTTCATTGCAGCACTGTTAGCAGCTAGGAATTCAGCTGGTGTTGTTTTCCTTGGGACATTTGGTGCACTTGCGGCGATGACTCTCATATCTGTCGTACTTGGACGTACTTTTCATTATGTTGATGAAATCTTGCCGTTCAGGTTTGGAGAAACTGATTTACCTGTTGATGATATTGCTGCTGTTTGCCTATTGGTGTACTTCGGGGTGTCTACCCTGCTGGATGCATCATCTAGCGATGGCCAAAAATCAGATGATGAGCAGAAGGAGGCAGAGTTAGCAGTTTCAGAATTTTCTGGAAATGGTGCTGGGATACTAGCCGCTGCTAGCACAATTGTCAGCACTTTTCTCTTGGTTTTTGTTGCTGAATGGGGTGATAAATCATTTTTCTCCACAATTGCCCTTGCAGCAGCTTCTTCTCCGCTTGGAGTCATAGCTGGAGCACTGGCTGGTCATGGCGTTGCAACTTTGCTAGCTGTACTTGGGGGCTCTTTACTGGGGACATTTTTGTCAGAGAAGGTTATTGCCTACATCGGAGGTGTTCTATTTCTCGTCTTTGCTGCGGTAACCGTATTTGAAATTGTGCAATAA 1125 0.4524 MHSHHSHPLLRPQVTPSSFPKPFPSSFLLLLPSTFCSKTLRSSTLSSSPILQNETKLRMFLSKDSPPCCNPPSRFEIDELRGTGRFTRSFKNCNNSPESVAYNSNRECHLAPPLVSSALKFMLFFGFLTLQDSSPAVAASDFSSGLNSFPFFGDIGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFLGTFGALAAMTLISVVLGRTFHYVDEILPFRFGETDLPVDDIAAVCLLVYFGVSTLLDASSSDGQKSDDEQKEAELAVSEFSGNGAGILAAASTIVSTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVTVFEIVQ* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0552 374 Pfam Uncharacterized protein family UPF0016 164 247 IPR001727 -
Apr7g0552 374 Pfam Uncharacterized protein family UPF0016 292 365 IPR001727 -
Apr7g0552 374 ProSitePatterns Uncharacterized protein family UPF0016 signature. 173 182 IPR001727 -
Apr7g0552 374 PANTHER PROTEIN PAM71, CHLOROPLASTIC 98 374 - -
Apr7g0552 374 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 98 374 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0552 Apr-Chr7 11953908 11959084 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0552 - - lang:109331470 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0552 7 11953908 11959084 Apr7g0552 7 11953908 11959084 ECH