Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0546 ATGCGTAGCCGGGGATCACAAAGCCGGTTATCTGGTCACTCTTTTGGATCTCGAGTGTCTGTTCTCATGCTTGCCATGGTTGCTACCATGGCTACCATTTACGTTGCTGGCCGGCTGTGGCAGGATGCGGAAAGTAGGGCATATTTAATTGAAGAGCTTGAAAAAAAAACTGGTCAGGGTCACTTGGCTGTATCTGTTGATGATACACTTAAAATTATAGCCTGCAGGGAACAACATAAGAAGTTGTCAGCGCTTGAGATGGAACTAGCTGCAGCTAGACAGGAAGGTTTTGTTCCAAAGCACTTCTCAGGAAATGATGGGAAGCATGCTACCAAGAAGGTGCTTTCAGTTATAGGAATAATGACAACCTTTGGCCGAAAAAAGAACCGAGATGCAATCCGTAAGGCTTGGATGCAAACAGGTACCGCCATGAAAAAACTGGCTGATAAAAAAGGCATCATAGTGAGATTTGTAATAGGAAGAAGTGCAAATCACGGAGACAATTTGGACAAAGAAGTTGAAACAGAAAGCAGTCAGACCAATGACTTCATCATTCTTGATAATCAAGTGGAGACATCTGAAGAGAAAGCAAAAAAGATAAAATCATTCTTCATTTATGCAGTGGACAACTGGGATGCTGAATTTTATGCTAAGGTCAATGACGATGTCTATGTTAATCTTGATGGCTTTGGAGGAGTGCTAACTTCTTATTTGGACAAGCCCCGTGCTTATATTGGTTGTATGAAATCAGGCGAAGTTTTCTCTGAGCCGACAAATAAATGGCATGAGCCAGACTGGTGGAAATTTGGCGATAGAAAATCATACTTTCGGCATGCTTCAGGCGAGGTCTATGTCATTTCAAAAGCATTGGCACAGTTTGTTTCAATAAACAGATTTATTCTTCGTACATATGCACATGATGATATAAGCACAGGATCATGGTTTATTGGGATTGATGTGATGCACGTTGATGAAAGAAAGTTGTGCTGCTCCTCCTGGTCCCCAGGGGCAATTTGTGCAGCAGTATGA 1029 0.4218 MRSRGSQSRLSGHSFGSRVSVLMLAMVATMATIYVAGRLWQDAESRAYLIEELEKKTGQGHLAVSVDDTLKIIACREQHKKLSALEMELAAARQEGFVPKHFSGNDGKHATKKVLSVIGIMTTFGRKKNRDAIRKAWMQTGTAMKKLADKKGIIVRFVIGRSANHGDNLDKEVETESSQTNDFIILDNQVETSEEKAKKIKSFFIYAVDNWDAEFYAKVNDDVYVNLDGFGGVLTSYLDKPRAYIGCMKSGEVFSEPTNKWHEPDWWKFGDRKSYFRHASGEVYVISKALAQFVSINRFILRTYAHDDISTGSWFIGIDVMHVDERKLCCSSWSPGAICAAV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0546 342 Coils Coil 75 95 - -
Apr7g0546 342 Pfam Domain of unknown function (DUF4094) 17 94 IPR025298 -
Apr7g0546 342 Gene3D - 105 327 - -
Apr7g0546 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 337 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr7g0546 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr7g0546 342 PANTHER HEXOSYLTRANSFERASE 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0546 Apr-Chr7 11884197 11891492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0546 21 342 Glycosyltransferase AT5G53340 65.528 6.94e-163 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0546 K20854 - gmx:100802753 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0546 7 11884197 11891492 Apr7g0546 7 11884197 11891492 ECH