Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0540 ATGGATGAAGAATTGGCTGATGGGGCAACTCAGTTAGAGATTGCTGAGAATTCACAGCGCCAGAACAAGGAGGATGACGAGTATTCCCCTAACACAGAACGCCGAAAAATCTTTAAATCCCAAGAATTCCTACTTCCTGTTAAGCAGGACTACTCCCAGATACCACCTCGAGAATATGATGACATTCTGCAAGGTAAAAATGTAGTCGAAGTTATCAACCATGCAGCTCCATCACAACCCCCTCATGTAAACCATTTTATTGATGATGCTAATGTCATGGTTGAAGAATTAACAGTGAAAAGTTACAATGGCTCAAGTTTGGATATTGGTACATCAATCAACCGAGAGCAAATGTATAATAGGCAGAACCATTGGCAGAATCTGTATCAACTAGCTAGTAATTCAGGAATCGGAAATTCACTAAGTGATATTGGAAATAGAAACAGTGTACAGGCTACATCTAGTGCATGGGAGGATATTGGATCCACATCTTTCCCAGAAATATTAGCTAGAAAATCTCTTAGTGATGGCCAGAGTAATGTCATAGAACACTTGACAGCTGCTGAAAATAAAGAGGGCGCAGATGATGTTCATCCAGGAATACGGACAAAAATTATATCCAAATCAGGATTTGCTGAGTTTTTCATTAAAAATACATTAAAGGGCAAGGGAATTGTTTATAAAGGTCCAGCTTTTGATGGCTTCTGTGCTCAGTCTAGAGAGCAAACCCAGATAAAGACTGGAATTGAAGCGGAACAAAATCAGATGAAGACTGGCGTTGGCATAGATCAGAATCAAGTGAAGAACGAAATTGGTAATGATCAGACTCAGATGAAGAATGGTGTCAGTACTCACTTGAACTCTAGTGTATCAGGGAGCTTTGGTTCCAAAATTGCAAAGTTTCCTTCTTATTGTGGTGCTATGCCTAGATCTGGCAGGTCTGAATGTGATGGTGTGACTTTGAGGGAATGGCTGAAATCTGGGCACCACAAAGCAAGCAAAGTGGAAAGTTTGAATATATTTAGGAAGATTGTGGATTTGGTGGATGGCTCTCACTCTAAGGGAGTTGCTTTGCATAACCTGTGTCCATCTTATATTAAATTGTTGTCATCAAACCAGGTCATGTATGTTGGTTTTCCTATTCTAAAACAGATGGTGGATGGTGTTGTAAATTCTGAAGTTCTTCACTCAGATAATCCTTTTATTAGAAAAAGGCTGTCAGAACAAGTTTCATTTCCCTCTCTTGAAATGGGGTCAAAGAAGCAAAAAATTAATGAAAATTCAACAGTTGCTGGCAGTGACTTGTGTCTTGAAACTGCTAGCGATAGGAATCTTCATAGTCATACAGTTGGAGTGCAAGATTATTGTAATGAATATGAGGAAGATACCCAATTTTCTAAATATAACATTGGTAGAATGTCCAGCATCCCTCGTGTATCTAATGCATGTCAAAAGCCAGTGACTTCTTTATGTGAAAGATTGGAAAATAAATGGTATGCGAGTCCTGAGGGAGGTTGCACAACATCATCAAATATCTACTGCCTTGGTGTCCTCCTTTTCGAGCTACTTGGCCATTTTGACTCTGAAAGAGCACATATTGCAGCAATGTCAGATCTTCGTCATAGGATTCTTCCTCCAGTTTTCCTATCAGAAAATCCCAAGGAAGCAGGCTTTTGTCTTTGGCTGCTGCATCCTGAACCATCATCACGCCCACCAACAAGGGAAATCCTACAATCTGAGGTGATTAATGGATTGCAAGATTTGTATAGTGAGGAATTATCATCAAGTATTGACCAAGAAGATGCAGAATCAGAATTGTTATTGCATTTCCTTGTCTCATTAAAAGAGCAGAAGCAGAACAATGCCTTCAAATTGGTAGAAGAAATCAAGTGCTTGGAATCGGATATAGACGAGGTGGAGAAGAGGCATGGTTCAAGGAAATCCTTGGTTTCCTCTGCCTTGCAGAGTGATTACTCTTGTCAGAAAGATATTTTGCCTCTTAAAAAGGAACTTTTGAGTTTGGAAATCTTGCCCTCAATATCCCCTACCTCTAATTCCAATGAAGTGAGACTGATGAGAAATATATGTCATCTTGAAAGAGCTTATTTTTACATGAGATCCAAAGTTCAGCTTTCCGAAACAGATGCTGAGACTCACCCAGATAAAGATATACTAAGAAATCGTGAGAACTGGTATGCGGCTCAAAAAGGCGAGGAACAACCTAAAAGGAAAGATACTTTAGGAATATTCTTTGATGGTTTGTGCAAGTATGCACGTTATAGCAAGTTTGAAGTGCGTGGTGTACTAAGAAATGCTGATTTTAACAATCCTGCAAATGTAATTTGCTCTCTTAGCTTTGATCGGGATGAAGATTACTTTGCTTCTGCTGGCATATCCAAGAAAATAAAAATATTTGAGTTTAGTGCACTTTGCAATGACTCTGTTGATATCCATTATCCAGTAGTTGAGATGTCAAACAGATCAAAACTCAGCTGTGTTTGCTGGAATAACTATATTAAGAACTATCTTGCCTCTACAGACTATGACGGTATAGTGAAGTTATGGGATGCTAGTACAGGTCAAGAATTTTCTCAATTCACTGAACATGAAAAGAGGGCTTGGTCTGTTGACTTCTCTGTAGTATGCCCTACAAAATTTGCCAGTGGAAGTGATGATTGTACTGTCAAGCTGTGGAGTATCAGTGAGAGGAACTGTTTAGGCACAATCAGGAATGTTGCTAATGTCTGCTGTGTTCAATTCTCTGCTCATTCCTCCCACTTGCTGGCGTTTGGATCTGCGGATTACTCAACATATTGTTATGATCTTCGCAATCTTAGAAGTCCCTGGTGTGTACTGGCTGGCCATCGTAAAGCTGTAAGCTATGTCAAATTCTTAGACTCTGAAACACTTGTTTCTGCTTCTACTGATAATACATTGAAGATCTGGGATCTCAATAAAACCTCTCCTCTGGGTGCATCCCCTAGTGCTTGCAGCCTAACCCTGTCAGGACATACAAATGAGAAGAATTTTGTGGGTTTGTCAGTGGCTGATGGATACATTGCATGTGGTTCAGAAACAAATGAGGTTTACACCTATTATAGATCACTTCCAATGCCAATCACTTCACAGAAATTTGGATCCGTTGATCCCATTTCTGGTAGAGAGACCGATGATGACAATGGTCAGTTTGTTTCAAGTGTGTGCTGGAGAGGGAAATCAGACATGCTTATTGCGGCCAATTCAAGTGGATGTGTAAAAGTGTTACAGATGGTTTAA 3276 0.3974 MDEELADGATQLEIAENSQRQNKEDDEYSPNTERRKIFKSQEFLLPVKQDYSQIPPREYDDILQGKNVVEVINHAAPSQPPHVNHFIDDANVMVEELTVKSYNGSSLDIGTSINREQMYNRQNHWQNLYQLASNSGIGNSLSDIGNRNSVQATSSAWEDIGSTSFPEILARKSLSDGQSNVIEHLTAAENKEGADDVHPGIRTKIISKSGFAEFFIKNTLKGKGIVYKGPAFDGFCAQSREQTQIKTGIEAEQNQMKTGVGIDQNQVKNEIGNDQTQMKNGVSTHLNSSVSGSFGSKIAKFPSYCGAMPRSGRSECDGVTLREWLKSGHHKASKVESLNIFRKIVDLVDGSHSKGVALHNLCPSYIKLLSSNQVMYVGFPILKQMVDGVVNSEVLHSDNPFIRKRLSEQVSFPSLEMGSKKQKINENSTVAGSDLCLETASDRNLHSHTVGVQDYCNEYEEDTQFSKYNIGRMSSIPRVSNACQKPVTSLCERLENKWYASPEGGCTTSSNIYCLGVLLFELLGHFDSERAHIAAMSDLRHRILPPVFLSENPKEAGFCLWLLHPEPSSRPPTREILQSEVINGLQDLYSEELSSSIDQEDAESELLLHFLVSLKEQKQNNAFKLVEEIKCLESDIDEVEKRHGSRKSLVSSALQSDYSCQKDILPLKKELLSLEILPSISPTSNSNEVRLMRNICHLERAYFYMRSKVQLSETDAETHPDKDILRNRENWYAAQKGEEQPKRKDTLGIFFDGLCKYARYSKFEVRGVLRNADFNNPANVICSLSFDRDEDYFASAGISKKIKIFEFSALCNDSVDIHYPVVEMSNRSKLSCVCWNNYIKNYLASTDYDGIVKLWDASTGQEFSQFTEHEKRAWSVDFSVVCPTKFASGSDDCTVKLWSISERNCLGTIRNVANVCCVQFSAHSSHLLAFGSADYSTYCYDLRNLRSPWCVLAGHRKAVSYVKFLDSETLVSASTDNTLKIWDLNKTSPLGASPSACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVYTYYRSLPMPITSQKFGSVDPISGRETDDDNGQFVSSVCWRGKSDMLIAANSSGCVKVLQMV* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0540 1091 Gene3D Transferase(Phosphotransferase) domain 1 316 591 - -
Apr7g0540 1091 Coils Coil 615 642 - -
Apr7g0540 1091 Gene3D - 751 1091 IPR015943 GO:0005515
Apr7g0540 1091 ProSiteProfiles Trp-Asp (WD) repeats profile. 866 908 IPR001680 GO:0005515
Apr7g0540 1091 SMART WD40_4 1050 1089 IPR001680 GO:0005515
Apr7g0540 1091 SMART WD40_4 762 806 IPR001680 GO:0005515
Apr7g0540 1091 SMART WD40_4 859 899 IPR001680 GO:0005515
Apr7g0540 1091 SMART WD40_4 994 1033 IPR001680 GO:0005515
Apr7g0540 1091 SMART WD40_4 902 941 IPR001680 GO:0005515
Apr7g0540 1091 SMART WD40_4 945 983 IPR001680 GO:0005515
Apr7g0540 1091 SMART WD40_4 817 856 IPR001680 GO:0005515
Apr7g0540 1091 ProSiteProfiles Trp-Asp (WD) repeats profile. 952 992 IPR001680 GO:0005515
Apr7g0540 1091 PANTHER PROTEIN SPA1-RELATED 2 1 1091 - -
Apr7g0540 1091 ProSitePatterns Trp-Asp (WD) repeats signature. 843 857 IPR019775 -
Apr7g0540 1091 ProSiteProfiles Trp-Asp (WD) repeats profile. 823 865 IPR001680 GO:0005515
Apr7g0540 1091 MobiDBLite consensus disorder prediction 18 34 - -
Apr7g0540 1091 PRINTS G protein beta WD-40 repeat signature 843 857 IPR020472 -
Apr7g0540 1091 PRINTS G protein beta WD-40 repeat signature 886 900 IPR020472 -
Apr7g0540 1091 PRINTS G protein beta WD-40 repeat signature 970 984 IPR020472 -
Apr7g0540 1091 SUPERFAMILY WD40 repeat-like 774 1089 IPR036322 GO:0005515
Apr7g0540 1091 SUPERFAMILY Protein kinase-like (PK-like) 316 590 IPR011009 -
Apr7g0540 1091 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 952 985 - -
Apr7g0540 1091 ProSitePatterns Trp-Asp (WD) repeats signature. 970 984 IPR019775 -
Apr7g0540 1091 PANTHER PROTEIN SPA1-RELATED 2 1 1091 IPR044630 GO:0009640
Apr7g0540 1091 Pfam WD domain, G-beta repeat 861 899 IPR001680 GO:0005515
Apr7g0540 1091 Pfam WD domain, G-beta repeat 951 983 IPR001680 GO:0005515
Apr7g0540 1091 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0540 Apr-Chr7 11838216 11850945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0540 843 992 Miscellaneous Gene Families AT5G08390 25.625 8.85e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0540 K16240 - gmx:100778303 1847.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0540 7 11838216 11850945 Apr7g0540 7 11838216 11850945 ECH