Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0537 ATGGCGTCCGAAGATGCCACCGGAAAGACCGGTGTGCCGGCAACCCCTCCGATCGCCAATGTCGCCGCCGAAGCCAAGCTTCCAGGTGAAGGGGTAAAATCTCCATCTCGTACGCTTCTCAGCATATGCAAGTCTCTCGTTGCCGGCGGAGTTGCCGGTGGACTGTCACGAACAGCTGTGGCTCCTCTGGAGAGATTGAAGATTCTGCTGCAGGTACAAAACAGTCAGAATATAAAATACACTGGATCAATTCAAGGCTTAAAATATATATGGAAAACTGAAGGTTTTAGAGGAATGTTCAAAGGAAACGGAACTAATTGTGCTCGTATTATCCCAAATTCAGCAGTAAAATTCTTTACCTATGAACAAGCATCTAAGGGTGTTTTATGGCTCTACCAGCGGCAATCTGGAAATGAAGAAGCTCAGCTCACTCCTGTTCTGCGTCTTGGAGCTGGCGCATGTGCGGGAATCATTGCCATGTCTGCTACTTACCCAATGGACCTGGTGCGAGGAAGGCTAACTGTCCAGACAGAAGCGTCTCCTCGCCAATACAGAGGAATTTTTCATGCTCTTTCAACAGTCTTTCGGGAAGAAGGCCCTCGAGCTTTATATAAAGGCTGGCTACCTTCAGTCATAGGAGTAATACCGTATGTGGGTCTTAATTTTTCTGTATATGAATCTCTCAAAGACTGGTTCATTCGATCCAAACCATTTGGAATAGCTCAAGACTCCGAGCTAAATGTGACCACAAGGCTTGCTTGTGGAGCTGTTGCTGGAACTGTTGGCCAGACAGTAGCTTACCCTCTTGATGTCATTCGCCGAAGAATGCAAATGGGGGGCTGGAAAGATGCTGCTTCGGTGGTAGCTGGTGAGGTGAATAGCAAAGTTGAGTATACTGGCATGGTTGATGCATTCAGGAAAACTGTGCAGCGTGAGGGATTTGGAGCATTATACAAGGGCTTAGTTCCCAATTCAGTGAAGGTGGTCCCTTCTATAGCTATTGCTTTCGTGACATACGAGAAGGTCAAGGATATGCTTGGAGCAGAACTGAGAATAACTGATTGA 1065 0.4695 MASEDATGKTGVPATPPIANVAAEAKLPGEGVKSPSRTLLSICKSLVAGGVAGGLSRTAVAPLERLKILLQVQNSQNIKYTGSIQGLKYIWKTEGFRGMFKGNGTNCARIIPNSAVKFFTYEQASKGVLWLYQRQSGNEEAQLTPVLRLGAGACAGIIAMSATYPMDLVRGRLTVQTEASPRQYRGIFHALSTVFREEGPRALYKGWLPSVIGVIPYVGLNFSVYESLKDWFIRSKPFGIAQDSELNVTTRLACGAVAGTVGQTVAYPLDVIRRRMQMGGWKDAASVVAGEVNSKVEYTGMVDAFRKTVQREGFGALYKGLVPNSVKVVPSIAIAFVTYEKVKDMLGAELRITD* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0537 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 40 127 IPR018108 -
Apr7g0537 354 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 30 349 - -
Apr7g0537 354 PRINTS Mitochondrial carrier protein signature 45 58 IPR002067 GO:0055085
Apr7g0537 354 PRINTS Mitochondrial carrier protein signature 58 72 IPR002067 GO:0055085
Apr7g0537 354 PRINTS Mitochondrial carrier protein signature 102 122 IPR002067 GO:0055085
Apr7g0537 354 PRINTS Mitochondrial carrier protein signature 158 176 IPR002067 GO:0055085
Apr7g0537 354 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Apr7g0537 354 PRINTS Mitochondrial carrier protein signature 255 277 IPR002067 GO:0055085
Apr7g0537 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 345 IPR018108 -
Apr7g0537 354 SUPERFAMILY Mitochondrial carrier 40 341 IPR023395 -
Apr7g0537 354 Pfam Mitochondrial carrier protein 143 235 IPR018108 -
Apr7g0537 354 Pfam Mitochondrial carrier protein 245 346 IPR018108 -
Apr7g0537 354 Pfam Mitochondrial carrier protein 41 126 IPR018108 -
Apr7g0537 354 Gene3D Mitochondrial carrier domain 37 348 IPR023395 -
Apr7g0537 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 143 231 IPR018108 -
Apr7g0537 354 PANTHER SOLUTE CARRIER FAMILY 25 30 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0537 Apr-Chr7 11819114 11823839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0537 46 346 EF-hand Containing Proteins AT5G51050 39.404 2.65e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0537 K14684 - nnu:104603959 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0537 7 11819114 11823839 Apr7g0537 7 11819114 11823839 ECH