Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0533 ATGGCGAAGGAGTTATTGACGCTCGATAATGGCACAACATGCACTTCATGGAACTACTCTTCTACCAGACTCGCTGCTGGTTCCGTCGATGGCACGCTTTCGATCTTCGATTTCCCCGACCCACCCTCTTCCTCCCTCCGCTCTTCTTTCAAATCTAGGGTTCTGGAAGGAAACATCGTCAAGATTGTTTGGGTTCCGCCAGAATATGGCGATGCAGTTGCGTGTATTTCCGCTGATGGAATTGTGTCATTGTGGGAGGAGGTTGTGGAAGATTCACAGCCTCTTCAGTGGAAGATTTGTAGAAGCTTTGGAAACAGTTCAAGCAAAGTCCTTGATGTTCAATTTGGAATCTCTTTGACTAGTTTGAAAATGGTTGCCGCATATGCAGACGGTAATGTACAAGTTTTTGAGCTCTTGGATCCCTTGGAACTGAAAAACTGGCAGCTTCAGGCTGAATTTCAAAATGTTATTGAGTCAGTATCTGCATTTGGAAAGGCTACGTGTCTCTCTGCATCCATATCTTGGAATCCACAAAAGGGTGGAAACCGGGAATCCAGCTTCCTTATAGGTTTTAATTCAAATACATCAGAGCTTAATTCTTCCAAGGTATGGGAATTTGATCAAGCTCATCAAAGATGGCTTCCGGTGGCAGAATTGGCACTTCCTGAGGACAAGGGTGATCAGGTTTATGTTGTTGCATGGGCACCAAATATTGGCAGACCATATGAGATCATTGCTGTTGCAACACCCAAGGGACTTGCAATATGGCACCTTGGATTGAACCCTGATCATAATGGGAGACTCCCGGTGGAGAGAGTTGCACTATTGTCAGGTCATGAAGGCATGGTGTGGCAAATGGAGTGGGATATGAGTGGAATGACATTGGCCACTACAGGTCACGATGGAATGGTCCGATTGTGGCAGTCTAATCTCAATGGCGTTTGGCATCAGCAGGCTGCGTTTGAACCCTCTTCTTAG 978 0.4601 MAKELLTLDNGTTCTSWNYSSTRLAAGSVDGTLSIFDFPDPPSSSLRSSFKSRVLEGNIVKIVWVPPEYGDAVACISADGIVSLWEEVVEDSQPLQWKICRSFGNSSSKVLDVQFGISLTSLKMVAAYADGNVQVFELLDPLELKNWQLQAEFQNVIESVSAFGKATCLSASISWNPQKGGNRESSFLIGFNSNTSELNSSKVWEFDQAHQRWLPVAELALPEDKGDQVYVVAWAPNIGRPYEIIAVATPKGLAIWHLGLNPDHNGRLPVERVALLSGHEGMVWQMEWDMSGMTLATTGHDGMVRLWQSNLNGVWHQQAAFEPSS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0533 325 SUPERFAMILY WD40 repeat-like 10 308 IPR036322 GO:0005515
Apr7g0533 325 Pfam WD domain, G-beta repeat 276 307 IPR001680 GO:0005515
Apr7g0533 325 Gene3D - 9 322 IPR015943 GO:0005515
Apr7g0533 325 PANTHER NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER 6 324 IPR037363 GO:0005198
Apr7g0533 325 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 308 IPR001680 GO:0005515
Apr7g0533 325 PANTHER NUCLEOPORIN SEH1 6 324 IPR037597 GO:1904263
Apr7g0533 325 SMART WD40_4 43 86 IPR001680 GO:0005515
Apr7g0533 325 SMART WD40_4 96 137 IPR001680 GO:0005515
Apr7g0533 325 SMART WD40_4 1 37 IPR001680 GO:0005515
Apr7g0533 325 SMART WD40_4 269 308 IPR001680 GO:0005515
Apr7g0533 325 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 308 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0533 K14299 - gmx:100780788 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0533 7 11790031 11792621 Apr7g0533 7 11790031 11792621 ECH