Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0518 ATGGAGAACCTAATCTCTTTGGTGAACAAAATCCAGAGGGCTTGCACGGCTCTAGGCGACCACGGCGAAGCCACCGCCTTACCCACTCTCTGGGACTCCCTCCCCGCTATCGCCGTCGTCGGTGGCCAGAGCTCTGGAAAGTCCTCTGTATTGGAGAGCATTGTTGGGAAGGATTTCTTACCCCGCGGCTCTGGGATTGTTACCCGGCGACCCCTTGTTTTGCAGCTTCACAAGACTGACGAGGGTTCCAGAGAGTATGCAGAATTTCTTCACCTTCCCAGAAAAAGGTTCACCGATTTCGCTGCTGTGAGGAAGGAGATTCAAGATGAAACGGATAGAGAAACTGGACGAACGAAACAGATTTCAAGCGTCCCAATTCATCTTAGTATATATTCTCCCAATGAGGGTCAACCCGATAGTATTGTCCTAGACATTGAGAATATGGTTCGCTCCTACATTGAGAAGCCAAACTGTATAATTTTAGCTATTACACCAGCCAATCAAGATCTTGCAACATCTGATGCAATTAAAATATCCCGTGAAGTGGATCCCACCGGGGAAAGGACAATGGGAGTCTTGACAAAGATTGATCTTATGGACAAGGGCACTGATGCTGTTGAAATGTTGGAGGGGAGAGCTTTTAGATTAAAGTATCCCTGGGTTGGTGTTGTCAATAGATCACAAGCAGATATAAACAAGAATGTTGACATGATTGCTGCTAGGCATAGAGAACGTGAATATTTTTCTAGTACCCCTGAATATAAACACCTTGCTCACAGGATGGGTTCTGAGCATCTAGCAAAGATGCTTTCAAAGCATTTGGAGGCAGTTATCAAGTCCAAAATTCCAGGCATTCAATCTCTTATTAGTAAAACAATTGCTGAACTTGAAGCTGAACTGAGTCGTTTGGGAAAGCCTATTGCTGCTGATGATGGGGGAAAGTTGTATGCGATCATGGAAATATGCCGCTCTTTTGATCAAATATTTAAAGAACATCTTGATGGAGTGCGACCTGGAGGCGATAAAATTTATAATGTTTTTGACAATCAGCTCCCTGCTGCTTTAAAAAGGCTGCAGTTTGATAAGCAGCTTTCCATGGAAAATATAAAGAAACTTATTACAGAAGCTGATGGGTATCAGCCTCATCTTATAGCTCCAGAACAAGGATACCGTCGCCTCATTGAATCTTCTCTAACTACAATCAGGGGTCCAGCTGAGGCAGCTGTTGATGCGGTTCATTCCCAATTAAAGGACCTGGTTCACAAAGCTATGAGTGAGACTCTGGACTTGAAGCAATATCCTGGTCTGCGTGCAGAGGTTGGGAATGCTGCTATTGATTCCCTTGAAAGAATGAGGGAGGAAAGCAAAAAATCAACGCTACAGCTGGTTGATATGGAGTGTGGCTATTTGACTGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTGGATAAGGGTGGAAATCCTACACATTCAGTTTTTGATAGATATAATGATTCATATCTAAGGCGAATTGGAACCAATGTCCTGTCTTATGTTGGTATGGTCTGTGCTAGTCTGCGGCATTCAATTCCCAAGTCAATTGTCTATTGTCAAGTGCGGGAAGCCAAACGGAGCCTACTTGATCATTTCTTCACTGACCTGTATGAATCCTCTTTGCAGCCCAAGCGTCTGTCTTCATTACTGAATGAGGATCCTGCGATCATGGAAAGAAGAAGTGCCCTTGCTAAGAGACTTGAACTATACCGGAGTGCACAAACTGAGATAGATGCAGTTGCTTGGTCTAAGTAG 1788 0.4407 MENLISLVNKIQRACTALGDHGEATALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKTDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNEGQPDSIVLDIENMVRSYIEKPNCIILAITPANQDLATSDAIKISREVDPTGERTMGVLTKIDLMDKGTDAVEMLEGRAFRLKYPWVGVVNRSQADINKNVDMIAARHREREYFSSTPEYKHLAHRMGSEHLAKMLSKHLEAVIKSKIPGIQSLISKTIAELEAELSRLGKPIAADDGGKLYAIMEICRSFDQIFKEHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIKKLITEADGYQPHLIAPEQGYRRLIESSLTTIRGPAEAAVDAVHSQLKDLVHKAMSETLDLKQYPGLRAEVGNAAIDSLERMREESKKSTLQLVDMECGYLTVDFFRKLPQDVDKGGNPTHSVFDRYNDSYLRRIGTNVLSYVGMVCASLRHSIPKSIVYCQVREAKRSLLDHFFTDLYESSLQPKRLSSLLNEDPAIMERRSALAKRLELYRSAQTEIDAVAWSK* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0518 595 Pfam Dynamin GTPase effector domain 497 591 IPR003130 GO:0003924|GO:0005525
Apr7g0518 595 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 594 - -
Apr7g0518 595 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Apr7g0518 595 PRINTS Dynamin signature 34 52 IPR022812 -
Apr7g0518 595 PRINTS Dynamin signature 59 76 IPR022812 -
Apr7g0518 595 PRINTS Dynamin signature 184 200 IPR022812 -
Apr7g0518 595 PRINTS Dynamin signature 207 226 IPR022812 -
Apr7g0518 595 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 283 IPR030381 GO:0005525
Apr7g0518 595 Pfam Dynamin family 37 196 IPR045063 -
Apr7g0518 595 Pfam Dynamin central region 204 471 IPR000375 -
Apr7g0518 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 291 IPR027417 -
Apr7g0518 595 PANTHER DYNAMIN 2 594 IPR022812 -
Apr7g0518 595 SMART dynamin_3 1 234 IPR001401 GO:0003924|GO:0005525
Apr7g0518 595 ProSiteProfiles GED domain profile. 501 595 IPR020850 -
Apr7g0518 595 CDD DLP_1 33 283 IPR001401 GO:0003924|GO:0005525
Apr7g0518 595 Gene3D Dynamin, middle domain 309 555 - -
Apr7g0518 595 SMART GED_2 496 591 IPR003130 GO:0003924|GO:0005525
Apr7g0518 595 Gene3D - 1 292 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0518 Apr-Chr7 11585952 11591414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0518 - - gmx:100819043 1096.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0518 7 11585952 11591414 Apr7g0518 7 11585952 11591414 ECH
Apr7g0518 7 11585952 11591414 Apr2g1280 2 19047119 19053147 PCT