Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0514 ATGAAGCTGAAACATGAAGAACCACCCATCAAATATCAATTCCAAATGTCGAAGGAACAATCCAATACAAGCTTTTTTGGCCTCTCCTTCTCCTTCATGCTCTCGCTGTGGTGCCTCCTCTTCTTCTACGTTAAGCTTCGCCTCGTTCATGGCACTGGAGCTATGTTTGAGTTTAATGAATCAGATAATTCCAACAGTCATAGTCAGAAACTTTCAATACCCTCATACTCACTTCCTGAAACAAGTAGTTTGGCAGAAGTGTTTCGGCAAGTTTTAGGTAATAGTAATAATTTGGTGTGCAAACTACAACCTCCACAAGAGGGAAAGAAACTTGAACGATCGCAACTTCCTCATGGGAAACTTCACCCCAATAATGATGAATTTCCAAACATGACAAAACATGAAATAACCGAGGGCATGAACTCTGCGCTTGTCAATGTCAACATCACTCACCGGCTTGAACCTGATGGTTCAGTGTACAACTATGCCTCTGAGTCCAAAGGTGCAAAGGTTGTGGCTCAGAATAAAGAGGCCAAAGGGGCAAAAAATATACTCGGGAAGGATCATGATAAGTACCTGAGAAACCCTTGTTCTGTTGGCGGAAAGTTTGTTGTTATTGAGCTTTCAGAAGAGACTCTGGTTGATTCTGTGAAAATTGCTAACTTTGAACATTATTCTTCTAACTTCAAGGAATTTGAATTAGCTGGTAGTTTAAGCTACCCAACTGAAACATGGAGCATGCTGGGAAACTTTATTGCTGCCAATGTCAAGCATGCACAGATCTTTAAGCTGCCTGAACCCAAGTGGGTCAGGTATTTAAAATTGAGCTTGCTTAGTCATTATGGATCTGAGTTTTATTGCACACTGAGTGTTGTAGAAGTTTATGGGATCAATGCTATAGAGCGGATGCTCAAGGATCTTATAGTTGCTTCTGTGGGATCCGTTTCTGAGATGTTGCCAACGCATAATGTCAGCGACGTCCCTCCTTTGAAGTCAGAAGCTGGCCAAATTGACAGAAACGGAAAAGAAGATGATGGCAAGAACAATAATGTGGCTGCTGAGATACCAAGCAATGATGACACTCAAAAGTTAGATGCAGAAGTGGCAAAAAATCCTGCGATTGTGAACTTGATTCCCGATCCTGTAATAGAACTTAGACAACAGCTGAATGGTAGGATAGCTGGTGACACTGTTCTGAAGATTTTGATGCAGAAAGTGAGGTCAGTTGAGGTAAACTTATCTGCCTTGGAGGATTACATCAAAGAATTGAACAGGAGACAAGGGGTTAAAATACCGGATCTTGAGAAAGAGTTGTCCAGATTATCAGAAAGCCTTGGACAAAGCAAGTCAGAGATCAAAGATCTCTGGCAGTGGAACACAAATATGGAAAAAGAGATGTCTGAGGTTGAGTCCTGGAAGGATGCTGTCTCATCTCAACTTAATGAATTAGCCAAAGAAAACAGCATGCTAAGATCAGATGTTGCAAAGGTTGCAAGTAATCAAGCTAATCTGGAAACCAAAGAGCTTACTGTGTTAGCAACCAGTCTGGTTTTTGTATGCCTCGCAGTTGTCAAGATAATTTCAGTACACATGACGTTTTCTGCATCATACAATGCCGATAAGGTGCGCCAGACAATTAGAGGATGGGTTACATTATTCGCATGCTGTAGTGTAACAATATTCATTATCTTGTTCTTTAGCTAG 1704 0.4114 MKLKHEEPPIKYQFQMSKEQSNTSFFGLSFSFMLSLWCLLFFYVKLRLVHGTGAMFEFNESDNSNSHSQKLSIPSYSLPETSSLAEVFRQVLGNSNNLVCKLQPPQEGKKLERSQLPHGKLHPNNDEFPNMTKHEITEGMNSALVNVNITHRLEPDGSVYNYASESKGAKVVAQNKEAKGAKNILGKDHDKYLRNPCSVGGKFVVIELSEETLVDSVKIANFEHYSSNFKEFELAGSLSYPTETWSMLGNFIAANVKHAQIFKLPEPKWVRYLKLSLLSHYGSEFYCTLSVVEVYGINAIERMLKDLIVASVGSVSEMLPTHNVSDVPPLKSEAGQIDRNGKEDDGKNNNVAAEIPSNDDTQKLDAEVAKNPAIVNLIPDPVIELRQQLNGRIAGDTVLKILMQKVRSVEVNLSALEDYIKELNRRQGVKIPDLEKELSRLSESLGQSKSEIKDLWQWNTNMEKEMSEVESWKDAVSSQLNELAKENSMLRSDVAKVASNQANLETKELTVLATSLVFVCLAVVKIISVHMTFSASYNADKVRQTIRGWVTLFACCSVTIFIILFFS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0514 567 Coils Coil 431 451 - -
Apr7g0514 567 PANTHER SUN DOMAIN-CONTAINING PROTEIN 5 55 566 - -
Apr7g0514 567 MobiDBLite consensus disorder prediction 329 354 - -
Apr7g0514 567 Gene3D - 173 307 - -
Apr7g0514 567 Pfam Sad1 / UNC-like C-terminal 175 296 IPR012919 -
Apr7g0514 567 Coils Coil 406 426 - -
Apr7g0514 567 PANTHER MEMBRANE PROTEIN CH1 RELATED 55 566 IPR045120 GO:0016020
Apr7g0514 567 ProSiteProfiles SUN domain profile. 139 299 IPR012919 -
Apr7g0514 567 SUPERFAMILY Galactose-binding domain-like 198 295 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0514 Apr-Chr7 11545618 11548484 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0514 - - gmx:102668828 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0514 7 11545618 11548484 Apr7g0514 7 11545618 11548484 ECH