Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0321 ATGGCGAGTGAATCTGGCGCCAACGATTCTTCAACTCCGTCCTCGAGTTCCGCGGAATCTTACATTGGTTGTTTCATAAGCTTGATTTCTAAGTGCGAGATTCGCTACGAAGGCGTTCTCTATTTCCTTAACATTCAAGATTCCACCATTGGCTTGCAGAACGTTAGATCTTATGGAACAGAGGGGAGAAGAAAAGATGGTCCACAAGTTCCTCCAAGTGATAAGATTTATGAATATATTCTCTTCCGAAGCAATGACATTAAGAATTTGCAGATCAAGTCCCCCTCCACCCCTGGCAAATCAGAAGACCAGTTTTTTAGTGATCCAGCTATTATTCAGTCGCAATATTCTGGTTTGCTAAGCTCTCCAGTGGCCCCTGTTGGTGGTAGAATTTTGACAGAATCCATTCAAAGGCAAGATAACCCTGCAATATCCAGTACAGCCTTTCCTGTTGGATTGTCTTCTCATCAGTCAGTACCTCAACTGGGCCCTTCAAATCAATCTGCTGCTATCGAAGTTGCTAGTCATCCATCTTTTTCTTCAGCAATGTATTGGCAAAGGCACGGCGGGAAATCAAATGATAGTTCTCATTCTCTGCTCCCATCTAGTTCTCTTCAACCCCCATCCATGGCAGCATCCTTAGCTATGCAGAGCCAGACACAAACTGCAGAAACCCAGGTTCCTACAAGAAGGGGATGGACATCTTTATCAGAGTGTGGTCAACCTGTATCTTCGCCTATGGCTAAGACTCTTGTAAATCCGACTCCTTTACCTTCTACCAATTTACAAATTCCTAACTCTTTTGATATTCCACCCCTTTTGTCTACTAAGACACCTATGCCATATTCTGGATCCATGACTTTTGATGGATCAAACATGCCTCAGTTTTCTTCATCTCTCCAGGACATAAATTTTACTGAAGGTCAAATATCTGGAAAAATTTGTCCTGACCCAAGGCCAATTCATCCTCAACATGCTGTCCATCATTCTGCTTCTGCATTTGTAGATTCTACTTCTGGTCCCTTGCCCACACCTCCATCTTTGTTAACTCCAGATCAATTTGTACATCCTAGAGAACAGTTATTTTCTTCAACACATAATTTGAACCCTAATCAGAAGGATATGTGTTCTCTGTCTCTAACCCCCTCTGGTTCCTCTGCATTAATTCCTTCTCCAGCATCTCAAGCACCACTACTTCCACTACCAAATTTGCTGCAAAAGCCTCAATACCCAGCTTCACAGTTCACTGAAGAATTCAATTTTGAAGCCATGAATGAAAAATTCAAAAAGGATGAAGTATGGGGTTCTCTTGGAAAGGAAACTACAAAGATAGAGGGAGTGGAGGATAATACTTCTTTCAATGTTGGTGACAAAGAATGTCATGGAATGATGCCAGACCCTAAGTATGCATACAAGAAAGATGACTTTTTTGACACAATTTCTTGTAACTCTATGACTCGTGGATTGAGGAATGGACAAAATCGTTTATCTGAGAGAATGAAACTGGATACTGAGACATTTGGCAATTTCCAACAGAGACCTAATGTTGGTTATGGTGCTGGACGGGGTGGGAATTTCAGGGGCTCATATAATTGGGGAAGGGGTTATGGCTATCGTGGAAGAGGGCGTGGTCCAAATTTTCGATACTAG 1650 0.4218 MASESGANDSSTPSSSSAESYIGCFISLISKCEIRYEGVLYFLNIQDSTIGLQNVRSYGTEGRRKDGPQVPPSDKIYEYILFRSNDIKNLQIKSPSTPGKSEDQFFSDPAIIQSQYSGLLSSPVAPVGGRILTESIQRQDNPAISSTAFPVGLSSHQSVPQLGPSNQSAAIEVASHPSFSSAMYWQRHGGKSNDSSHSLLPSSSLQPPSMAASLAMQSQTQTAETQVPTRRGWTSLSECGQPVSSPMAKTLVNPTPLPSTNLQIPNSFDIPPLLSTKTPMPYSGSMTFDGSNMPQFSSSLQDINFTEGQISGKICPDPRPIHPQHAVHHSASAFVDSTSGPLPTPPSLLTPDQFVHPREQLFSSTHNLNPNQKDMCSLSLTPSGSSALIPSPASQAPLLPLPNLLQKPQYPASQFTEEFNFEAMNEKFKKDEVWGSLGKETTKIEGVEDNTSFNVGDKECHGMMPDPKYAYKKDDFFDTISCNSMTRGLRNGQNRLSERMKLDTETFGNFQQRPNVGYGAGRGGNFRGSYNWGRGYGYRGRGRGPNFRY* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0321 549 SMART LSM14_2 15 116 IPR025609 -
Apr7g0321 549 ProSiteProfiles DFDF domain profile. 407 443 IPR025762 -
Apr7g0321 549 SUPERFAMILY Sm-like ribonucleoproteins 20 96 IPR010920 -
Apr7g0321 549 PANTHER SCD6 PROTEIN-RELATED 14 543 - -
Apr7g0321 549 MobiDBLite consensus disorder prediction 185 240 - -
Apr7g0321 549 Pfam FDF domain 414 509 IPR019050 -
Apr7g0321 549 ProSiteProfiles TFG box profile. 491 511 IPR025768 -
Apr7g0321 549 Gene3D - 12 97 - -
Apr7g0321 549 ProSiteProfiles FFD box profile. 469 484 IPR025761 -
Apr7g0321 549 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 14 543 - -
Apr7g0321 549 SMART FDF_2 413 511 IPR019050 -
Apr7g0321 549 CDD LSm14_N 21 92 IPR025609 -
Apr7g0321 549 Pfam Scd6-like Sm domain 21 94 IPR025609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0321 Apr-Chr7 8587043 8593304 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0321 K18749 - gmx:102669894 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0321 7 8587043 8593304 Apr7g0321 7 8587043 8593304 ECH