Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0316 ATGAGAACATGGGTAGTTTTCCGATTGCCACTAAAGCTCATAACAAGATGGGGCTATAGAAATTTAGCCTTGCTTGGACCAAGAACGTCGTCATCATCCCATTCACTTTTTTCACAGAGCTTCCAAAATGGGAAGTTCAGCATTGTTCAACGATGCAGGGTTCCCATTCTTCCATATGCACCTGCCTTGTTGTCATGTTGTTGTCGTTGTTTCTGCACTATCATTCACCTGTTTGACGAAATGCAACAAAGATCTCTACATTTGAGAGATATCCATTTTGAGGTTGTTATTGATTACATTAAATTGTCCCTCAAAAAACCCAAAATTGTGACTGCCACTGTTGCCCATTGCGCAGTCTTAAAGTTAGGTGCTTTGGCTCACGTTTCCACTTCAACATCTCTACTCACTGTTTATTCTAAGGTTGGGGACTTTACCTCTTCAAGGGATTTGTTTGATGAGATTCACAACAAAGATGTGATTGCTTGGAATGCTATTATTGCTGCATCTCTTGAAAATAATTACTATAGAACAGCAATGGAGTTCCTTGAGAAAATGATGAAGGCACAATGTGGGTTTGATTCCACTACTCTGTTGCTTATGGTATCAGCTTCTTTACATGTGAAAAACTTTGGTCAAGGAAGGGCAATTCATTGTGTGAGTATAAAATTTAGGATGCTAGTGGATATCAGTTTAGGTAATGGTCTTATTGACATGTATGCTAAGTGTGGTGATCTAAGCTCTTCGGAGTGTTTATTTGAAGAAATGGAATATAAAGATGTTGTTTCATGGAATTCAATAATGAGTGGAAGTATTTACAATGGTAATCCTGAGAAAACATTGTGTTACTTCAAAAGGATGACTTTTTTGGAAGAAACAGCAGACAATGTCAGTCTATCTTGTGCTATTTCAGCATCTTCAAGTTTGAGAGAACTGGGTTTTGGGCAGTCCATTCATGGGCTGGGAATCAAACTGGGTTACAGGGACAGTTCACATTTGTCGGTTTCCAACTCTCTCATTTCATTATATTCACAATGTGAAGATGTGGAATCTGCTGAAACAGTTTTCAGAGAAATAGCGCACAAAGATATTGTTTCCTGGAATGCAATGATGGAAGGACTTTCTTCAATTGGAAAGATTAATGAAGTATTTGATCTTCTGGTTGAAATGCAAATAAGAGAGTCTTTCCAACCTGATATAGTGACATTAACTACCATAATTCCACTTTGTGCAGAATTGATGCTCTCTAGAGAAGGAAGGACAATCCATGGATTTGCAATTCGAAGACATATGTTGTCTGATCATCTTAATTTGCTGAACAGCCTAATAGACATGTATTCGAAGTGCAACCTTGTGAAGAAAGCCGAGCTCTTGTTCAATTCTACCGAAGATAGAGACTTAGTCTCATGGAATTCAATGATATCTGGCTATTCCTTGAACAAGTATTCTGATGAAGCTCAAATCTTGTTTAGAGAGATGCTGCGTTGGGGTCCAAATTGCAGCTCATCAACTGTTTTTGCTATTCTTTCTTCTTGCAACTCTCTTAATAGTGTCCACTTTGGAAAATCTGTTCACAGCTGGCTGTTGAAATCTGGATTTTTGAACCACGTTCTTATAGTAAATTTTCTCATGCACATGTATATCAATTGTGGAGATTTGACAACCAGTTTCTCAATTTTGCATGAGAATTCTGCTTTAGCAGATATAGCTTCATGGAACACTGTAATTGTGGGCTGCATACGAGTTGAACATTTTAAAGAGGCTTTAGAGACTTTCAAGTTGATGAAACATGAAACTCCTTTCAACTATGACTCCATAACCCTTGTAAGTGTCTTGTCAGCCTGTGCAAACCTGGAATTATTCAGCCTAGGAAAATCTATCCATGGCCTTGCTCTTAAATCTCCTTTAGCATCAGATACTCGTGTTCAGAACTCGCTAATTACCATGTATGACAGGTGCAAGGACATCTACAGTGCCAGAGTAGTGTTTAAACTCTGCTCCATTCCCAATCTATGCTCATGGAATTGCATAATTTCTGCTTTCTCTCATAATGGAGAAAGTAGAGAAGCATTGGAACTATTTCATCATCTTCAATTTGAACCAAATGAGATCACCATTGTTAGTGTTCTCTCTGCTTGCACTCAAATTGGTATCCAAAGACATGGAAAACAAGTTCATGCCCATGTGTTCAGAACTTGCATTCAAGATAATTGTTTCATAGCAGCAGCTCTTATAGATTTCTATAGCAACTGTGGAAGATTGGACACTGCTGTCCAAGTATTCAGGCATTCAGAGAAGTCTGAATCAGCTTGGAATTCAATGATTTCTGCATATGGATATCATGGAAATGGAGAAAAAGCAATCAAACTCTTCCATGAAATGTATGAATCAGGAAAAACGGTGACCAAAAGCACTTTTGTTAGCCTTTTATCTGCATGCAGCCATTCAGGACTCGTCAAGCAAGGTCTTTGGTACTATGAATGTATGTTGGAGAAATATGGAGTACAACCTGAGACTGAACATCAAGTCTATATGGTTGACATGCTAGGCAAATCAGGTAGATTGGATGATGCTTACAAGTTTGTTAAGGGGTTACAATCCAATGCCAGCTCAGGTGTATGGGGAACTCTCTTAAGTGCATGCAACTATCATGGAGAACTCAAGTTGGGGAGACAAGTTGCTGAACATCTTTTTGAGCTTGAACCTCAAAATGTTGGATATTACATATCATTGTCAAATATGTATGTTGCTGTAGGAAGCTGGAAAGATGCTAATGATTTGAGACAATCTATTCAGGACCAAGGATTAAGAAAACCGGCAGGTTATAGTCTTATTGACGTTGGTTTGGGATAA 2850 0.3842 MRTWVVFRLPLKLITRWGYRNLALLGPRTSSSSHSLFSQSFQNGKFSIVQRCRVPILPYAPALLSCCCRCFCTIIHLFDEMQQRSLHLRDIHFEVVIDYIKLSLKKPKIVTATVAHCAVLKLGALAHVSTSTSLLTVYSKVGDFTSSRDLFDEIHNKDVIAWNAIIAASLENNYYRTAMEFLEKMMKAQCGFDSTTLLLMVSASLHVKNFGQGRAIHCVSIKFRMLVDISLGNGLIDMYAKCGDLSSSECLFEEMEYKDVVSWNSIMSGSIYNGNPEKTLCYFKRMTFLEETADNVSLSCAISASSSLRELGFGQSIHGLGIKLGYRDSSHLSVSNSLISLYSQCEDVESAETVFREIAHKDIVSWNAMMEGLSSIGKINEVFDLLVEMQIRESFQPDIVTLTTIIPLCAELMLSREGRTIHGFAIRRHMLSDHLNLLNSLIDMYSKCNLVKKAELLFNSTEDRDLVSWNSMISGYSLNKYSDEAQILFREMLRWGPNCSSSTVFAILSSCNSLNSVHFGKSVHSWLLKSGFLNHVLIVNFLMHMYINCGDLTTSFSILHENSALADIASWNTVIVGCIRVEHFKEALETFKLMKHETPFNYDSITLVSVLSACANLELFSLGKSIHGLALKSPLASDTRVQNSLITMYDRCKDIYSARVVFKLCSIPNLCSWNCIISAFSHNGESREALELFHHLQFEPNEITIVSVLSACTQIGIQRHGKQVHAHVFRTCIQDNCFIAAALIDFYSNCGRLDTAVQVFRHSEKSESAWNSMISAYGYHGNGEKAIKLFHEMYESGKTVTKSTFVSLLSACSHSGLVKQGLWYYECMLEKYGVQPETEHQVYMVDMLGKSGRLDDAYKFVKGLQSNASSGVWGTLLSACNYHGELKLGRQVAEHLFELEPQNVGYYISLSNMYVAVGSWKDANDLRQSIQDQGLRKPAGYSLIDVGLG* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0316 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 766 800 IPR002885 -
Apr7g0316 949 Pfam PPR repeat family 768 813 IPR002885 -
Apr7g0316 949 Pfam PPR repeat family 361 408 IPR002885 -
Apr7g0316 949 Gene3D Tetratricopeptide repeat domain 326 412 IPR011990 GO:0005515
Apr7g0316 949 Gene3D Tetratricopeptide repeat domain 413 518 IPR011990 GO:0005515
Apr7g0316 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 397 IPR002885 -
Apr7g0316 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 228 262 IPR002885 -
Apr7g0316 949 TIGRFAM PPR: pentatricopeptide repeat domain 364 398 IPR002885 -
Apr7g0316 949 TIGRFAM PPR: pentatricopeptide repeat domain 672 697 IPR002885 -
Apr7g0316 949 TIGRFAM PPR: pentatricopeptide repeat domain 570 596 IPR002885 -
Apr7g0316 949 TIGRFAM PPR: pentatricopeptide repeat domain 769 797 IPR002885 -
Apr7g0316 949 PANTHER OS01G0913400 PROTEIN-RELATED 75 419 - -
Apr7g0316 949 PANTHER OS01G0913400 PROTEIN-RELATED 567 946 - -
Apr7g0316 949 PANTHER OS01G0913400 PROTEIN-RELATED 401 716 - -
Apr7g0316 949 PANTHER OS01G0913400 PROTEIN-RELATED 331 559 - -
Apr7g0316 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 669 699 IPR002885 -
Apr7g0316 949 Pfam PPR repeat 439 460 IPR002885 -
Apr7g0316 949 Pfam PPR repeat 161 189 IPR002885 -
Apr7g0316 949 Pfam PPR repeat 233 259 IPR002885 -
Apr7g0316 949 Pfam PPR repeat 467 496 IPR002885 -
Apr7g0316 949 Pfam PPR repeat 336 359 IPR002885 -
Apr7g0316 949 Pfam PPR repeat 570 596 IPR002885 -
Apr7g0316 949 Pfam PPR repeat 130 158 IPR002885 -
Apr7g0316 949 Pfam PPR repeat 261 286 IPR002885 -
Apr7g0316 949 Pfam PPR repeat 672 695 IPR002885 -
Apr7g0316 949 Gene3D Tetratricopeptide repeat domain 600 732 IPR011990 GO:0005515
Apr7g0316 949 Gene3D Tetratricopeptide repeat domain 62 221 IPR011990 GO:0005515
Apr7g0316 949 Gene3D Tetratricopeptide repeat domain 820 943 IPR011990 GO:0005515
Apr7g0316 949 Gene3D Tetratricopeptide repeat domain 222 319 IPR011990 GO:0005515
Apr7g0316 949 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN DOT4, CHLOROPLASTIC-LIKE 401 716 - -
Apr7g0316 949 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN DOT4, CHLOROPLASTIC-LIKE 75 419 - -
Apr7g0316 949 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN DOT4, CHLOROPLASTIC-LIKE 567 946 - -
Apr7g0316 949 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN DOT4, CHLOROPLASTIC-LIKE 331 559 - -
Apr7g0316 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 567 597 IPR002885 -
Apr7g0316 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 465 499 IPR002885 -
Apr7g0316 949 Gene3D Tetratricopeptide repeat domain 733 819 IPR011990 GO:0005515
Apr7g0316 949 Pfam E motif 883 944 IPR046848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0316 Apr-Chr7 8507785 8510706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0316 294 947 Glycoside Hydrolase AT3G49170 30.643 5.41e-96 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0316 - - gmx:100775736 1494.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0316 7 8507785 8510706 Apr7g0316 7 8507785 8510706 ECH