Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0310 ATGCCAGCAACTAGGGTTTTCGGTGCTGTCGCCGGTAGAGCTTTCATGGAGGCGGCGGCGAAGAGCGCAGCGAAGAAAACTGCGGCGTCCCGCGTTGCCGCCGCAAAAACCACTGTGAAGAAGACATTGTCCAACCGAAGCATCAACTCCGGCATACAGAAGGTGGTTCCAGTGTCTTCCCAGCTCGGCAACTTCCTCGGCGCTTCTCAAGTTTCGCGAACCGACGCCGTTAAAAGAGTGTGGGAATACATCAAGCTGCAAAATCTTCAGAATCCTTCAAATAAGAAGGAGATATTTTGTGATGAAAAGCTGAAGACCATTTTTGATGGGAAAGATAAGGTTGGGTTCACAGAGATTGCTAGATTGCTGTCTACCCATTTTGCGAAATCTGGTTGA 396 0.4949 MPATRVFGAVAGRAFMEAAAKSAAKKTAASRVAAAKTTVKKTLSNRSINSGIQKVVPVSSQLGNFLGASQVSRTDAVKRVWEYIKLQNLQNPSNKKEIFCDEKLKTIFDGKDKVGFTEIARLLSTHFAKSG* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0310 131 SUPERFAMILY SWIB/MDM2 domain 48 129 IPR036885 -
Apr7g0310 131 CDD SWIB-MDM2_like 56 127 - -
Apr7g0310 131 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 3 130 - -
Apr7g0310 131 Gene3D SWIB/MDM2 domain 46 131 IPR036885 -
Apr7g0310 131 ProSiteProfiles SWIB/MDM2 domain profile. 51 129 IPR003121 -
Apr7g0310 131 PANTHER PROTEIN TRI1-LIKE 3 130 - -
Apr7g0310 131 Pfam SWIB/MDM2 domain 56 127 IPR003121 -
Apr7g0310 131 SMART swib_2 52 131 IPR019835 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0310 Apr-Chr7 8454042 8455757 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Apr7g0310 SWIB 2.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0310 - - gmx:100795307 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0310 7 8454042 8455757 Apr7g0310 7 8454042 8455757 ECH