Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0308 ATGCCACAGAATTGCATAGCACCAAAACCAGAATACTGCAATAGTCATCAATCTGTGGAAGGAACCCCAGAGATGACTGAGACCCATAACTCAAGTGTCCTCTCCTTCCCCATGCAAACCAATGAACAACAACAATCTTTACCAAAACTCATTATGTACCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAAGTTAAACTAGAGCAAAGAGGAGTGTGTTGGGGCAGTACATGGACTTGCAAGGAGAAGACCATATTGAATGGAATCACAGGTGTGGTGTGTCCAGGTGAAATACTAGCCATGTTGGGGCCATCAGGTAGTGGCAAAACCACACTTCTCACAGCTCTTGGAGGCCGTCTCAGTGGCAAATTATCTGGTAAGATCACATACAACGGTCAACCTTTCTCAGGTGCCATGAAAAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGCTATACCCTCACCTAACTGTCACTGAAACTCTAGTGTTCACTGCACTTCTAAGGCTACCCAACAGCTTGACCCGAGATGAAAAAGTTCAACATGTAGAGAGAGTGATCACTGAGTTAGGACTAACTCGTTGCAGGAGTAGCATGATAGGAGGTCCACTTTTTAGAGGAATATCAGGTGGAGAGAAAAAGAGAGTGAGCATAGGCCAAGAAATGCTCATAAACCCAAGTCTCTTGCTGTTAGATGAACCTACTTCAGGTTTGGATTCCACCACAGCACAAAGGATCCTCAACACTATCAAACGCCTTGCTAGTGGTGGTAGAACTGTTGTGACCACTATTCACCAACCCTCTAGTCGCCTCTACTACATGTTTGATAAGGTGGTCTTGCTCTCTGAAGGGTGCCCCATATACTATGGTCCTGCTTCAACTGCTTTGGACTACTTTTCATCTGTTGGTTTTTCCACATGTGTGACTGTCAATCCAGCTGATCTATTGCTTGATCTAGCCAACGGGATTGCCCCGGATTCCAAGCATGTAACTGAACAAAGTGAGGGGTTGGAACAGGAGAGGAAGCAGGTAAGAGAATCTCTCATATCTGCTTATGAGAAGAACATAGCTACAAGGCTGAAAGATGAGGTTTCCAGTCTGGAAGTGAACAACTACAACATCACAAAAGATGCTTACGCAAGAAATCCCATAAAGCCAGAGCAATGGTGCACAAGCTGGTGGCATCAGTTCAAAGTATTATTGCAAAGGGGAGTAAGGGAGCGACGGTTTGAAGCCTTCAACAGGTTGAGAATATTCCAAGTCATAAGTGTGGCTTTTCTTGGTGGACTCTTGTGGTGGCATACTCCAGAGTCACACATTGAAGACCGGGTTGCATTGCTCTTTTTCTTTTCTGTCTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACGTTTCCTCAAGAGAGGAGAATGCTGATCAAGGAACGGTCATCAGGAATGTACCGCCTTTCTTCCTACTTTCTAGCTAGAACAATTGGAGACTTGCCACTGGAGCTTGCACTTCCAACTGCATTTGTCTTCATAATCTACTGGATGGGAGGGCTTAAACCTGATCCTGTTACTTTTATACTTTCCCTTCTTGTGGTTCTTTACAGTGTTGTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGATTAAACAGGCAACAACTCTAGCTTCTGTGACAACACTTGTGTTTCTCATTGCTGGAGGCTACTATATACAACAGATTCCTCCATTCATAGTGTGGCTCAAGTACTTGAGCTATAGCTACTACTGCTACAAGCTGCTTCTTGGTGTCCAATACAATGAAAATGATTACTATGAGTGCTCAAAGGGGGAGTTGTGCAAGGTTGCAGATTTTCCTCCTATCAAATCAATGGGTTTGAACCATATGTGGGTTGATGTGTTCATTATGGCCCTCATGTTGGTGGGTTATCGGCTAGTTGCTTATTTAGCACTGCACAGAGTTAGGTAG 1977 0.4406 MPQNCIAPKPEYCNSHQSVEGTPEMTETHNSSVLSFPMQTNEQQQSLPKLIMYPITLKFEELVYKVKLEQRGVCWGSTWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNGQPFSGAMKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLTRDEKVQHVERVITELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALDYFSSVGFSTCVTVNPADLLLDLANGIAPDSKHVTEQSEGLEQERKQVRESLISAYEKNIATRLKDEVSSLEVNNYNITKDAYARNPIKPEQWCTSWWHQFKVLLQRGVRERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYECSKGELCKVADFPPIKSMGLNHMWVDVFIMALMLVGYRLVAYLALHRVR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0308 658 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524
Apr7g0308 658 Gene3D - 74 303 IPR027417 -
Apr7g0308 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 27 656 - -
Apr7g0308 658 CDD ABCG_EPDR 54 291 - -
Apr7g0308 658 Pfam ABC transporter 88 237 IPR003439 GO:0005524
Apr7g0308 658 Pfam ABC-2 type transporter 397 602 IPR013525 GO:0016020|GO:0140359
Apr7g0308 658 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 27 656 - -
Apr7g0308 658 SMART AAA_5 96 286 IPR003593 -
Apr7g0308 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 309 IPR003439 GO:0005524
Apr7g0308 658 Pfam ABC-2 type transporter 266 338 IPR043926 GO:0140359
Apr7g0308 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0308 Apr-Chr7 8440632 8443570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0308 86 285 Calmodulin-binding Proteins AT2G36910 30.332 2.38e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0308 K05681 - gmx:100780191 1239.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0308 7 8440632 8443570 Apr7g0308 7 8440632 8443570 ECH