Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0300 ATGGAAGGGACTATTCCAGTGATTGATCTAGAGAAGATTTCAGACCCAGATGAAAGCAAGAAGCTAAGAGAGGCATGTGAAAAATGGGGTTGCTTTAGGATCATCAACCACTCTATTTCCACAACCCTCATGGCGGATATGAAGGAGGTGATTGCAGCTTTGTTCGATCGTCCTACGGAGATGAAAAATTGCAACTCAGCAGTGATTGCTGGAAGTGGTTACATGGCACCAAGTGCAGTCAACCCTCTCTATGAGGCCTTGTCCATCTATGATTTTTGTTCCTCTCAAGCTATGAACAATTTCTGCTCTCAACTTGATGTCTCACCCCACCAGAGGCAAATAGTGGAAGCATATGGCCAAGCAATTCATGGTTTAACAGTGAAAATAGGACAAAAGATGGCTGAATCTGTGGGCGTAGTGGATGCTGATTTTGAGGATTGGATATGCCAATTCAGAATTAACAATTATCACTTCACCCCAGAAGCTGTAGGGTCCTCTGGAGTTCAAATTCACACAGATTCAAGCTTCCTAACAGTTCTTCAAGATGATGAAAATGTTGGTGGTCTTGAAGTCATGCACATTTCTGGCTCCTTTGTACCTGTCCCTCCATTACCTACCACCCTCCTTGTCAATCTTGGTGACATTGGCCATGTATGGAGTAACGGAAGGTTTCGCAATGTGGAGCACCGTGTAATATGCAAGGAAGCAAGGAAGCGTTTATCAATTGCTACATTTATGTTAGGACCAAGGAATGGGAATGTTGAGGCTCCAGCAGAATTGGTGAGCCATGATCATCCACGTCTTCATCAACCTTTTGTTTATGAAGATTATAGAAAGGCTAGAGTCTCCAACAAGATGCACTCTGGTCAAGCCCTTCAGCTATTTCGCGTAGGAACTATGACGGGGGAATCAATGGGCAATGGAAAATGA 930 0.4387 MEGTIPVIDLEKISDPDESKKLREACEKWGCFRIINHSISTTLMADMKEVIAALFDRPTEMKNCNSAVIAGSGYMAPSAVNPLYEALSIYDFCSSQAMNNFCSQLDVSPHQRQIVEAYGQAIHGLTVKIGQKMAESVGVVDADFEDWICQFRINNYHFTPEAVGSSGVQIHTDSSFLTVLQDDENVGGLEVMHISGSFVPVPPLPTTLLVNLGDIGHVWSNGRFRNVEHRVICKEARKRLSIATFMLGPRNGNVEAPAELVSHDHPRLHQPFVYEDYRKARVSNKMHSGQALQLFRVGTMTGESMGNGK* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0300 309 SUPERFAMILY Clavaminate synthase-like 4 286 - -
Apr7g0300 309 Pfam 2OG-Fe(II) oxygenase superfamily 152 245 IPR044861 -
Apr7g0300 309 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 295 - -
Apr7g0300 309 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 147 249 IPR005123 -
Apr7g0300 309 Gene3D - 3 300 IPR027443 -
Apr7g0300 309 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 4 295 - -
Apr7g0300 309 Pfam non-haem dioxygenase in morphine synthesis N-terminal 5 65 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0300 Apr-Chr7 8360029 8361774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0300 5 297 Glycosyltransferase AT5G59530 26.214 1.64e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0300 K23947 - gmx:100783059 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0300 7 8360029 8361774 Apr7g0300 7 8360029 8361774 ECH