Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0291 ATGGAAGTTCGCCGGCGAGTCATGAACCCGGGCCGTTCGGTTCCCGCCGGCGAATCGCTGAAACAGAAAAACCATAAGAACCACGATTCGCAGTCGCAGTCGCAGTCGCAGTCGCAGTCGTACCTAACAAACGGCGTCTTCTTCGGTCTCTTCTTCTCGGTGGCATATTTCCTCCTCCACCGATGGCGCGAGAAGATCCGCACCTCCACGCCGCTCCACGTCCTCACGCTCTCCGAACTCGCCGCCATCGCTTCTCTCATCGCCTCCGTCATCTACCTCATGGCCTTCTTCGGCATTGGCTTCATCCTCCACCCGTTCCTCAGCTCTCGCTCTTCCTCCGACGACGACCTCGACCTCCTCGACGACGACGACATTGCCAAGCACGACGCTCGTCCCCCTGGCCCCTGCCCCGCCGCCCTCGCCGACATCCCCGCCGTGGCGCCGAAGCCGCTCAAACTCGACACCGAGAAACAGAAACCGCCACCGACGCCTCTCTCCTCTGACGACGAGGAGGTGGTCCGTGCGGTGGTGTCGGGGTCGATTCCGTCGTACTCATTGGAATCGAGGCTTGGAGATTGCCTGAGAGCGGCTTCGATTCGGCACGAAGCGGTGGAGAGAGTGACAGGGAGGTCGTTGGAGGGTTTACCAGTGGAAGGTTTCGATTACGAATCGATATTAGGACAGTGTTGTGAGATGCCGATAGGGTTCGTTCAGATCCCGGTTGGGGTGGCTGGGCCCCTGCTTCTTGACGGGAAGGAGTACACGGTTCCTATGGCCACCACGGAGGGTTGTTTGGTGGCTAGCACTAACAGAGGTTGCAAAGCCATTCACGTTTCCGGTGGAGCTTCCTCCATGCTCCTCCGTGACGGGATGACCAGAGCCCCCGTGGTTAGGTTCAGCTCCGCCAAAAGAGCTTCTGAACTCAAGTTCTACTTGGAAGACCCTCTTAATTTCGATTCCCTTGCTGTCGTTTTCAACAAGTCAAGCAGATTTGCGAGATTACAGAGTATTAAGGCGGGTATAGCGGGGAAGAATTTGTACATTAGATTCAGTTGCACCACAGGGGATGCCATGGGGATGAACATGGTATCCAAGGGAGTTCAAAACGTGCTTTCTTTCCTTCAGAGTGATTTTCCTGACATGGATGTTATTGGGATATCTGGAAATTTCTGTTCGGATAAGAAAGCGGCGGCTGTGAACTGGATTGAAGGGAGAGGGAAGTCAGTGGTGTGTGAGGCTGTGATTAAGGAAGAGGTGGTGAAGAAGGTTTTGAAGACTAGCGTTGAGGCTTTGGTTGAGCTGAACATGCTCAAAAACCTCACTGGCTCTGCTGTGGCTGGTGCTCTTGGTGGGTTTAACGCCCATGCTAGTAACATTGTTTCTGCTATATATTTAGCCACTGGACAGGATCCTGCTCAGAATGTCGAGAGTTCCCACTGCATAACTATGATGGAAGCGGTAAATGATGGCAAGGATCTTCACATCTCTGTCACTATGCCTTCCGTTGAGGTGGGCACAGTTGGAGGGGGCACACAGCTAGCATCGCAGTCAGCATGCCTAAATTTACTTGGTGTTAAGGGTGCGAGCAAGGAGTCCCCAGGTGCTAACTCAGGGCTATTGGCAACCATAGTAGCTGGTTCAGTCCTCGCCGGGGAACTCTCACTGATGTCTGCAATTGCAGCAGGGCAACTTGTTAATAGCCACATGAAATACAACAGATCAAGCAAGGATGTCACCAAAATTGTCTCTGGTGCGGTCCCATGA 1764 0.5385 MEVRRRVMNPGRSVPAGESLKQKNHKNHDSQSQSQSQSQSYLTNGVFFGLFFSVAYFLLHRWREKIRTSTPLHVLTLSELAAIASLIASVIYLMAFFGIGFILHPFLSSRSSSDDDLDLLDDDDIAKHDARPPGPCPAALADIPAVAPKPLKLDTEKQKPPPTPLSSDDEEVVRAVVSGSIPSYSLESRLGDCLRAASIRHEAVERVTGRSLEGLPVEGFDYESILGQCCEMPIGFVQIPVGVAGPLLLDGKEYTVPMATTEGCLVASTNRGCKAIHVSGGASSMLLRDGMTRAPVVRFSSAKRASELKFYLEDPLNFDSLAVVFNKSSRFARLQSIKAGIAGKNLYIRFSCTTGDAMGMNMVSKGVQNVLSFLQSDFPDMDVIGISGNFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTSVEALVELNMLKNLTGSAVAGALGGFNAHASNIVSAIYLATGQDPAQNVESSHCITMMEAVNDGKDLHISVTMPSVEVGTVGGGTQLASQSACLNLLGVKGASKESPGANSGLLATIVAGSVLAGELSLMSAIAAGQLVNSHMKYNRSSKDVTKIVSGAVP* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0291 587 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A REDUCTASE 1 583 - -
Apr7g0291 587 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 290 406 IPR009023 -
Apr7g0291 587 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 164 562 IPR009029 GO:0015936|GO:0016616
Apr7g0291 587 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 504 511 IPR023076 GO:0004420
Apr7g0291 587 Gene3D - 165 239 IPR023282 GO:0004420
Apr7g0291 587 MobiDBLite consensus disorder prediction 152 171 - -
Apr7g0291 587 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 349 363 IPR023076 GO:0004420
Apr7g0291 587 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 229 250 IPR002202 GO:0004420|GO:0015936
Apr7g0291 587 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 256 276 IPR002202 GO:0004420|GO:0015936
Apr7g0291 587 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 347 365 IPR002202 GO:0004420|GO:0015936
Apr7g0291 587 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 387 412 IPR002202 GO:0004420|GO:0015936
Apr7g0291 587 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 438 464 IPR002202 GO:0004420|GO:0015936
Apr7g0291 587 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 492 513 IPR002202 GO:0004420|GO:0015936
Apr7g0291 587 TIGRFAM HMG_CoA_R_NADP: hydroxymethylglutaryl-CoA reductase (NADPH) 169 573 IPR004554 GO:0004420|GO:0005515|GO:0008299
Apr7g0291 587 CDD HMG-CoA_reductase_classI 170 573 IPR004554 GO:0004420|GO:0005515|GO:0008299
Apr7g0291 587 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 1 583 IPR002202 GO:0004420|GO:0015936
Apr7g0291 587 MobiDBLite consensus disorder prediction 1 36 - -
Apr7g0291 587 Gene3D - 290 406 IPR009023 -
Apr7g0291 587 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 169 573 IPR002202 GO:0004420|GO:0015936
Apr7g0291 587 Pfam Hydroxymethylglutaryl-coenzyme A reductase 197 573 IPR002202 GO:0004420|GO:0015936
Apr7g0291 587 Gene3D - 240 560 IPR023074 GO:0004420
Apr7g0291 587 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 558 571 IPR023076 GO:0004420
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0291 Apr-Chr7 8251075 8254746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0291 41 579 Lipid Metabolism Gene Families AT1G76490 74.539 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0291 K00021 - gmx:100790033 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0291 7 8251075 8254746 Apr7g0291 7 8251075 8254746 ECH