Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0273 ATGGCGAGCATAAGGCCTTTGCCAGAGGCTGTTCGTAGCTCGGTGCGTTCTGGCATTTTCTTGTTCGATTTCGCGCGTGTCGTTGAGGAACTGCTTTTCAATAGCCTCGATGCTCGTGCTACTAAGGTATCGGTGTTTGTTAGTGTTGGGAACTGCTATTTGAAAGTTGTAGATGATGGAAGTGGAATCACTCGAGATGGACTGGAATTGGTGGGAGAGAGATACGCAACATCAAAATTTCTTAATTTGGCTGACCTGAATGCCACAAGTGAAAACTTTGGTTTTCGTGGGGAAGCTTTAGCTTCCATTTCCGAAATCTCTTTATTGGAAATTGTGACAAGAACACATGGAAGGCCAAATGGGTATCAAAAAGTATTGAAGGGGTGCAAGTGTTTATATCTTGGTATTGATGATGACAGAAAGGAAGTGGGAACAACAGTTGTTGTTCGTGATTTATTTTACAACCAACCAGTCCGGAGAAAACACATGCAATCCAGCCCCAATAAGGTACTGCAATCAATCAAGAAATGTGTAATGCGGCTTGCACTTGTACACCCAAATATTTCCTTCAGAGTTGTTGATATCGAAAGAGAGGACGAGCTCTTTTGCACACATGCTGCTTCTTCTCCCCTGTCACTTATAACCAGTGGCTTTGGTGTGGAGGTCACAAGCTCTCTTCACAATTTAGAAGTTGAGAATGATAAAATAAAGCTTTCTGGATATGTATCCAGTCCTTGCAATACTTTGAACATGAAGGCCTTGCAGTATGTCTATGTTAATTCACAGTTTGTTTGCAAGGGCCCTATTCATAAGCTTGTGAATCAGTTGGCTATTCTGTTTGAGAATCAGGACTCATGGAATACTGATAATGAGTTCCACAACAAGAAGAGAACTAGGTCTCAAGCTTGCCCAGCTTATATCTTGAATTTAAATTGCCCCCGATCGTTGTATGATTTGACCTTTGAGCCATCAAAAACTTATGTTAAATTCAAGGATTGGACTCCCATACTAAACTTCATTGAGAAGGCTCTCAAACAATTCTGGGAGGAAAATATAGGAGAGCTGTCCAATCAAGCCACTTTCATTGTGCAAGAAGATCAACCAGAGAAAGGAGATGTCAACATCATTTCAGGAGTATCAGATATATCAGAATTTAGTAGCCAAAATCGTGAGGATTACCTAGATCTCTTCTTTTCTGCTTCGGACAAGCTAATTGAGGATAACTTTCACCACTCCAACATGGAAGGTGCTGGAACCTCCCTTGGTTACTTGCATAAAGGGACTGCAGTGTTCAAAGAGCAAAAGAGTAAGGGAGACTTTCTATGTCAGACTGGTTATTCTGGCAATTTATTGGATGGTTCGCATACCCAGTGCATGCCCACTGTGATGAGAAAGCATAATAGTTTGTTGCAAGGAGATTACTTTTATGATGGTAAAATTCCTGCTGCAGAAAAATTCTATGATAATTTACCATGTAATGCTACAAGTTCTTCACACAGAAGAAAATTCCATGAAGTAGAAGCTGATGTGCTCAGTGAATCATTTGAACATGATTTACTTGATGACTGCAATGGATTCTATTCTGCTGTAAATATTAACAGAGATTTGCAAAAGCCTTTTCTAAGGAGATGCTCTACACAAGAAGGAAGCATTCTGGATGAGAAGGATTTGTTTATAAATGACAAACATGAACTCCAACCTGATAGTATTTGGAACAAGCAAAATCTGGGGGAGCATTATGGAAGGGATGAGGATTTATATTCCTATCCCTGCCCAGAAGTTGCAAAAAGATTAAAGATGTCTCAAGATTCTGATTTTATTATTAGAGCATATGCCAAAGAAAATTCTCTCCCTGCAGATTCATGCTATTTGGAAACACAAATAGGAAGCTCTGGGTCTGATGACCAGTTATTAAATTCTGAATGGCATCCTGTCTACCAGGAACCCTCATCTCAAACAACTGCATTGGGTGTTTACCATACAACTCTTATTAATGATTATCTTGGAGGAGTATCTAGACATAAAAGGATCCACCGTACAAAACTTTTTGATGATGGAGAAAATGAATGCAACTTCAACTACAATATGTCGAAGAATGCCAACCAACATCACTGTACATCAAATTTTGCAAATACTGGATTTAATTTTGATGATGCTGGTGATTGTGGTGAAATATTCAACAGATTAGTCGACTGGCCTGATTTTGGTGATATATATTCTACAAGGTCAGATATTTTAAATGAGGAGCCAGACTGGCCGTTGTCTGAGTTGTGCATTAAAAGCTGCAATAAACCTGACAAAAACAAGGGCAAAAGGAATCATTTTAGAAATCCAATTTTGGAGGAGAACCATGAAAGATCTAGAAGAAGTTTTTCAGCTCCTCCTTTTCATAGAAGCAAAAGGAGATTTTTCTCTTTAAATCATCCTTCAGAAATGATTGCCAAAAGACAGATTGACCGAGCATCCAATCCTGCTTTCAATCATCAAGAAGCTAGTAATTTTAAATATCCTCAACAATCTCCCAATGCTCTTTACCCAAGCACTGAAGAACTCTTTTTGCAGGAATCCAAAACTGATGTGAAACAGAGCTCAGAGGTTCTGGGAAATATGCAGGTTAATGACATTCCAAAGGTTGATGGATTTGAAAGTTTCAACATTCAAAACAGTGCTCCATCTAGGGAATTTATCTCTAAGGAAGTACAAGATTCCATAGATTATGGGTCCAAATGGAGGAACTGCTCTCCCGAAATTACACATGCTGCAGATGAAAGAATCAGACTTGAAGAATTGCGTCAAAAGGTATTATCTGGTGAAGCTAAAGCAATCACCTATCTAGATGCTGAACAGGAACTGGCACTGCCAGAGATTGGTTATCAACTACTACATAGTTATAGTGAACAGATTAAACACTGGGGCTGGATCTGCAGCATTCATGCTCAAAATTCTGAATCATTTAGAAGGAATTTGAATATCCTCAACAGGCCACAAATGGCTGTCACACTTATTGCGGTACCGTGTATTTTAGGTGTCAATTTAAATGACGTTGATCTTTTAGAATATCTTCAGCAGCTTGCTGACACTAATGGATCATCAACAATGCCACCCTCTGTCGTACGATTGCTAAATTTGAAAGCTTGCAGAGGTGCTATTATGTTTGGGGATTCGTTGCTACCATCTGAATGTTCCCTTCTAGTTGAAGAGCTAAAGCATACTTCACTTTGTTTCCAATGTGCTCATGGGAGACCAACAACTGTTCCTCTAGTCAACCTGGAGGCACTGCATAATCAGATAGCCAAGCTTGGACTAATGAGTGAATGCTCAAGTGGTGAGTGGCATGGATTACATAGACAGAAAATATGTGTTGAGCGTGCAGCACAGCGCTTATGTTCTGCCAAAGGAAGTTGA 3405 0.3959 MASIRPLPEAVRSSVRSGIFLFDFARVVEELLFNSLDARATKVSVFVSVGNCYLKVVDDGSGITRDGLELVGERYATSKFLNLADLNATSENFGFRGEALASISEISLLEIVTRTHGRPNGYQKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKHMQSSPNKVLQSIKKCVMRLALVHPNISFRVVDIEREDELFCTHAASSPLSLITSGFGVEVTSSLHNLEVENDKIKLSGYVSSPCNTLNMKALQYVYVNSQFVCKGPIHKLVNQLAILFENQDSWNTDNEFHNKKRTRSQACPAYILNLNCPRSLYDLTFEPSKTYVKFKDWTPILNFIEKALKQFWEENIGELSNQATFIVQEDQPEKGDVNIISGVSDISEFSSQNREDYLDLFFSASDKLIEDNFHHSNMEGAGTSLGYLHKGTAVFKEQKSKGDFLCQTGYSGNLLDGSHTQCMPTVMRKHNSLLQGDYFYDGKIPAAEKFYDNLPCNATSSSHRRKFHEVEADVLSESFEHDLLDDCNGFYSAVNINRDLQKPFLRRCSTQEGSILDEKDLFINDKHELQPDSIWNKQNLGEHYGRDEDLYSYPCPEVAKRLKMSQDSDFIIRAYAKENSLPADSCYLETQIGSSGSDDQLLNSEWHPVYQEPSSQTTALGVYHTTLINDYLGGVSRHKRIHRTKLFDDGENECNFNYNMSKNANQHHCTSNFANTGFNFDDAGDCGEIFNRLVDWPDFGDIYSTRSDILNEEPDWPLSELCIKSCNKPDKNKGKRNHFRNPILEENHERSRRSFSAPPFHRSKRRFFSLNHPSEMIAKRQIDRASNPAFNHQEASNFKYPQQSPNALYPSTEELFLQESKTDVKQSSEVLGNMQVNDIPKVDGFESFNIQNSAPSREFISKEVQDSIDYGSKWRNCSPEITHAADERIRLEELRQKVLSGEAKAITYLDAEQELALPEIGYQLLHSYSEQIKHWGWICSIHAQNSESFRRNLNILNRPQMAVTLIAVPCILGVNLNDVDLLEYLQQLADTNGSSTMPPSVVRLLNLKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLGLMSECSSGEWHGLHRQKICVERAAQRLCSAKGS* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0273 1134 Pfam DNA mismatch repair protein, C-terminal domain 216 347 IPR013507 GO:0005524|GO:0006298|GO:0030983
Apr7g0273 1134 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 23 202 IPR036890 -
Apr7g0273 1134 Gene3D - 2 208 IPR036890 -
Apr7g0273 1134 MobiDBLite consensus disorder prediction 768 792 - -
Apr7g0273 1134 Gene3D - 940 1051 IPR042121 -
Apr7g0273 1134 PANTHER DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 1 1092 IPR028830 GO:0006298
Apr7g0273 1134 SUPERFAMILY DNA mismatch repair protein MutL 919 1087 IPR037198 -
Apr7g0273 1134 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1092 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Apr7g0273 1134 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Apr7g0273 1134 SMART MutL_C_2 906 1056 IPR014790 GO:0005524|GO:0006298
Apr7g0273 1134 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 120 - -
Apr7g0273 1134 SUPERFAMILY Ribosomal protein S5 domain 2-like 199 349 IPR020568 -
Apr7g0273 1134 Gene3D - 215 353 IPR014721 -
Apr7g0273 1134 CDD HATPase_MutL-MLH-PMS-like 11 198 - -
Apr7g0273 1134 Gene3D - 919 1087 IPR042120 -
Apr7g0273 1134 SMART DNA_mis_repair_2 214 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
Apr7g0273 1134 TIGRFAM mutl: DNA mismatch repair protein MutL 3 328 IPR002099 GO:0005524|GO:0006298|GO:0030983
Apr7g0273 1134 MobiDBLite consensus disorder prediction 768 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0273 Apr-Chr7 8075913 8085076 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0273 K08739 - gmx:100788019 1681.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0273 7 8075913 8085076 Apr7g0273 7 8075913 8085076 ECH