Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0267 ATGACGCAATCTCATGATCCCTTTCCCTACCCTCCCATTGACCCCGTCAACTTCGATCTCATCATCGTCGGCACTGGCCTATCGGAATCCGTTATCGCCGCCGCCGCATCTGCCCTCGGGAAAACCGTCCTCCACCTCGACCCTAACTCCTTCTACGGCAGTCACTTTGCCTCCCTCTCCCTTAACGATCTCACTTCCTACCTCAATTCTCCCAATTCTCTCCCCGTAACCGCCACCCCACCTGGCGACTCCGACGACGTCGTCATCGACCTGATCCGGCAACCGCTGTGCTCCGACGCGGAAATCGTCTCGTGCGCTTCCGACAATGACGCGGCGTTTCTGCGCGAAAATTCGAGAAAGTTCAGCGTCGATTTGGGAGGACCGAGGGCGCTGTTCAGCGCGGACAAGATGATCGATCTGTTGTTGAAGTCAGGTGCAGCACAGTATTTGGAGTTCAAGGGAATCGATGTGAGCTTGGTGTATGAAGCTAATGCGGGTTTGGTGAACGTGCCGGATTCGCGTGGAGCGATTTTCAGAGACAAGAACCTTTCTCTGAAGGAGAAGAACCAGTTGATGAGGTTCTTCAAGCTTGTTCAGCAGCACTTGGGTGAGAATCATGAGGATGGAAAAATTTCGGTGGAAGATATGGAGAGTCCGTTTGTTAGTTTCTTGGAGAAAATGAAGTTGCCGCCTAAGATTAAAGCGATTCTTTTGTATGCTATAGCCATGGTAGATTACGATCAAGACAATAATGAGGTTTGTAAAGATTTACTTAAAACAAAAGATGGAATAGATCGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCAAGTGCACCTGGGGCTTTGCTTTATCCTATTTATGGTGAAGGAGAACTACCACAAGCTTTTTGTCGCGGTGCTGCTGTAAAAGGTTGCATTTATGTTCTAAGAATGCCAGTTATTTCTCTGCTTATGGATAAGGTTACCGGGCTTTATAAAGGTGTTAGATTAGCTTCGGGTCAGGATTTATATAGCCACCAACTAATCCTGGATCCATCCTTGACAATTCCATCAGCGTTGTCTTTGTCTCCAAGAGATTTTCCCTGTGAAAGGCTCCAATTGTTGAATCAGAGAGATATTAAAGGAATGGTGGCTAGGGGAATATGCATCACAAGGAGTTCCATTAAGCCAGATGTAACAAATTGCTCGGTGGTGTATCCTCCTAGATCTTTGTATCCTGAACAGGTGACATCAATCAAAGCTCTTCAGATAGGATCTAATCTTGCTGTTTGTCCTGAGGGAACCTTTATTTCATACTTTTCCACTTTGTGCAATGATGCTGATGAAGGAAAGAAGTTGCTAAAAGCAGCCATGAATGCTCTTCTTACACTGCCTGTATCTGGAAGCTCTGAAAGTATTCCCATTGTTCAAAGTGATAGTGAAGATATAAAACCCATCGTGCTCTGGAGTGCATTTTATATTCAGAAATTAATTACGAGTAAATTTGAATTTATCAGCTCCACTCCTACACCGGATGGAAGTCTGAACTACAATGACCTTTTAGATGCAACTGAGAAGCTTTTTGGTCAGATGTACCCGGAAGAAGAATTCTTTCCAAAGACCGCAGCACCTGAAGATACTATTGATGAGGATGAAAGTGGGTTAACTATGGAGAGTTAA 1665 0.4517 MTQSHDPFPYPPIDPVNFDLIIVGTGLSESVIAAAASALGKTVLHLDPNSFYGSHFASLSLNDLTSYLNSPNSLPVTATPPGDSDDVVIDLIRQPLCSDAEIVSCASDNDAAFLRENSRKFSVDLGGPRALFSADKMIDLLLKSGAAQYLEFKGIDVSLVYEANAGLVNVPDSRGAIFRDKNLSLKEKNQLMRFFKLVQQHLGENHEDGKISVEDMESPFVSFLEKMKLPPKIKAILLYAIAMVDYDQDNNEVCKDLLKTKDGIDRLAQYSSSVGRFPSAPGALLYPIYGEGELPQAFCRGAAVKGCIYVLRMPVISLLMDKVTGLYKGVRLASGQDLYSHQLILDPSLTIPSALSLSPRDFPCERLQLLNQRDIKGMVARGICITRSSIKPDVTNCSVVYPPRSLYPEQVTSIKALQIGSNLAVCPEGTFISYFSTLCNDADEGKKLLKAAMNALLTLPVSGSSESIPIVQSDSEDIKPIVLWSAFYIQKLITSKFEFISSTPTPDGSLNYNDLLDATEKLFGQMYPEEEFFPKTAAPEDTIDEDESGLTMES* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0267 554 Gene3D - 15 532 IPR036188 -
Apr7g0267 554 Pfam GDP dissociation inhibitor 117 455 IPR018203 GO:0005092|GO:0007264
Apr7g0267 554 Pfam GDP dissociation inhibitor 17 104 IPR018203 GO:0005092|GO:0007264
Apr7g0267 554 PANTHER RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A 14 541 - -
Apr7g0267 554 PANTHER RAB GDP-DISSOCIATION INHIBITOR 14 541 IPR018203 GO:0005092|GO:0007264
Apr7g0267 554 PIRSF Rab_ger_ger_transf_A_euk 5 112 IPR001738 GO:0005968|GO:0006886|GO:0018344
Apr7g0267 554 PIRSF Rab_ger_ger_transf_A_euk 106 554 IPR001738 GO:0005968|GO:0006886|GO:0018344
Apr7g0267 554 PRINTS Rab GDI/REP protein family signature 19 37 IPR018203 GO:0005092|GO:0007264
Apr7g0267 554 PRINTS Rab GDI/REP protein family signature 37 54 IPR018203 GO:0005092|GO:0007264
Apr7g0267 554 PRINTS Rab GDI/REP protein family signature 137 153 IPR018203 GO:0005092|GO:0007264
Apr7g0267 554 PRINTS Rab GDI/REP protein family signature 187 202 IPR018203 GO:0005092|GO:0007264
Apr7g0267 554 PRINTS Rab GDI/REP protein family signature 290 311 IPR018203 GO:0005092|GO:0007264
Apr7g0267 554 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 95 492 - -
Apr7g0267 554 SUPERFAMILY FAD-linked reductases, C-terminal domain 376 493 - -
Apr7g0267 554 SUPERFAMILY FAD/NAD(P)-binding domain 16 349 IPR036188 -
Apr7g0267 554 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 170 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0267 Apr-Chr7 8033109 8038504 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0267 K23460 - gmx:100795946 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0267 7 8033109 8038504 Apr7g0267 7 8033109 8038504 ECH