Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0266 ATGATCCGATACGCACCGTTTGATCCAGAAGTGACGACCAAACTGTGTCGCTTGTTTGAACCATTTTTGCTGTCACTCGGAAAGTCTTCAAACCCCTTTACGCTGAGAGAGTGCAACCAAATCCACGCCAAGCTCATAGTTTCCCAATGCATTTCACAAACCCACTTAACCAACACCCTTTTAAATTTGTACTCCAAGTTCGCTCACTTTCGCCATGCCCACCTTCTGTTCGACCAAATGCCTCACAGGAATGTTGTCTCCTGGACAACCTTAATTTCCGCTTATCTTCGAAATGGGTTTCTCCCAAAAGCCTTTGAGATGTTCAATCAGATGCGTGCATCGAATGAGAGACCCAATGAGTACACTTTATCTGTTCTGCTTCGAGCCTGTGCCACTCCTGCATTGTGGGATTTGGGTTTGCAGATTCACGGCTTGGTGGTTCGCTTTGGGTTTGAGAGAGACAAGTTTGCTGGGAGTTCTCTTGTTTATATGTACTTCAATAGTGGCAGTGATTTGGGGGATGCGTGTCGTGTTTTTCATGGATTGTTGGAGAGAGACCTTGTTGTATGGAATGTTATGATTTCCGGGTTGGCTCAAGTTGGTGACTTTGGCATGGTTCAGAGGTTGTTTTCTGAAATGTGGGAGATCCAAGGCTTGAAACCTGATGATAGTACGTTTGTTAGCTTGCTCAAGTGCTGTTCTTCATTGGAAGAGGTGAAGCAAATCCATGGGCTAGTGTGCAAGTTTGGTGCTGAAGTGGATGCTGTGGTGGGCAGTGCTCTGGTTGACTTGTATGCCAAATGTGGGGATGTAGGTTCTTGCATGAAAATCTTTGACTCCATGGAGGAGAAGGATAGTTTTGTTTGGAGTTCTATCATTTCGGGCTATACCATGAATAATAGAGGAGAGGAAGCTGTGCATTTCTTCAAGGACATGTGTAGACAAAGGGTGAAACCAGATCAGCACGTGTTGTCTAGTACTTTGAAAGCTTGTGTTGAAATAGGGGACTTGAACACAGGCGTTCAAGTGCATGGCCAAATGATTAAAAATGGGCATCAAAACGATTGTTTTGTCGCAAGTGTGCTGTTGACTCTCTATGCCAGTTTTGGTGAACTAGTGGATGTGGAAAATGTGTTCAGAAGAATTGATGATAAGGATATTGTAGCATGGAACTCTATGATCTTGGCTCATGCTCAACTGGAGCAGGGATCTGGTCCCTCTATGAAACTATTACAAGAACTTCGCAGAACAACCTCTTTGCAAATTCAAGGTGCTACTGTAGTTTCTGTTTTGAAGTCTTGTGAGAATAAATCAGATTTGCCTGCAGGTAGACAAATTCATTCACTTATAGCGAAATTAAGTATTAGCCGTCACACTTTGGTTGGCAATGCATTAGTCCACATGTACTCTCAGTGTAGACAAATTGGTGATGCATTTAAAGCTTTTGTTGATATTGTCTGGAAAGATGACAGTTCTTGGAGTTCTATTATTGGAACTTATAAACAAAATGGGATGGAATCAGAAGCTTTACAGCTATGCAAAGAGATGTTGGCTGATGGAATCACTTTTACCAGTTATAGCCTTCCACTTTGTATTTCAGCTTGCTCACAACTTTCAGCTATACACGTGGGTAAACAATTCCATGTTTTTGCTCTCAAGTCTGGTTACAGCCATGATGTCTATGTGGGAAGTTCCATTATAGACATGTACGCAAAATGTGGAACCATGAAGGAATCAGAGAAAGTTTTCGGTGAACAAGTAGAGCCAAATTTAGTAATTTATAATGCCATGATATGCGGATATGCACATCATGGAAAAGCACAAGAAGCCGTAGAAGAATTCAGTAGGCTAGAGAAGAATGCTTTGACCCCTAATCATGTAACTTTCTTGGCTGTGCTATCAGCTTGTAGCCATTCCGGTTATGTTGAAGATACATTGCATTTCTTTACGTTGATGCTTCAAAAATACAAGATTAGGCCAGAATCTGAGCATTATTCGTGCCTAGTTGATGCCTATGGTCGGGCAGGAAGGTTGGAGGAAGCTTACCAAATAGTGCAAAAAGATGGAAGTGAATCAGCATGGAGAACATTACTAAGTGCTTGCAGGAATCATAACAACACAGAGATTGGAGAAAAATCTGCGATGAAGATGATAGAATTGAATCCCAGTGATCATGCTTCGTATATTCTTCTTTCAAATATTTACGTCGGAGAGGGAAAATGGGTAGAAGCTCTTGAATGTAGGAACAAAATGGCCAAGATTCGTGTGAAGAAAGACCCAGGAAGTAGTTGGTTGATCTGA 2301 0.4189 MIRYAPFDPEVTTKLCRLFEPFLLSLGKSSNPFTLRECNQIHAKLIVSQCISQTHLTNTLLNLYSKFAHFRHAHLLFDQMPHRNVVSWTTLISAYLRNGFLPKAFEMFNQMRASNERPNEYTLSVLLRACATPALWDLGLQIHGLVVRFGFERDKFAGSSLVYMYFNSGSDLGDACRVFHGLLERDLVVWNVMISGLAQVGDFGMVQRLFSEMWEIQGLKPDDSTFVSLLKCCSSLEEVKQIHGLVCKFGAEVDAVVGSALVDLYAKCGDVGSCMKIFDSMEEKDSFVWSSIISGYTMNNRGEEAVHFFKDMCRQRVKPDQHVLSSTLKACVEIGDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYASFGELVDVENVFRRIDDKDIVAWNSMILAHAQLEQGSGPSMKLLQELRRTTSLQIQGATVVSVLKSCENKSDLPAGRQIHSLIAKLSISRHTLVGNALVHMYSQCRQIGDAFKAFVDIVWKDDSSWSSIIGTYKQNGMESEALQLCKEMLADGITFTSYSLPLCISACSQLSAIHVGKQFHVFALKSGYSHDVYVGSSIIDMYAKCGTMKESEKVFGEQVEPNLVIYNAMICGYAHHGKAQEAVEEFSRLEKNALTPNHVTFLAVLSACSHSGYVEDTLHFFTLMLQKYKIRPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWRTLLSACRNHNNTEIGEKSAMKMIELNPSDHASYILLSNIYVGEGKWVEALECRNKMAKIRVKKDPGSSWLI* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0266 766 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 84 118 IPR002885 -
Apr7g0266 766 Gene3D Tetratricopeptide repeat domain 337 404 IPR011990 GO:0005515
Apr7g0266 766 Gene3D Tetratricopeptide repeat domain 134 246 IPR011990 GO:0005515
Apr7g0266 766 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 285 319 IPR002885 -
Apr7g0266 766 Pfam PPR repeat 564 585 IPR002885 -
Apr7g0266 766 Pfam PPR repeat 664 686 IPR002885 -
Apr7g0266 766 Pfam PPR repeat 492 521 IPR002885 -
Apr7g0266 766 Pfam E motif 704 765 IPR046848 -
Apr7g0266 766 Pfam PPR repeat family 186 233 IPR002885 -
Apr7g0266 766 Pfam PPR repeat family 589 637 IPR002885 -
Apr7g0266 766 Pfam PPR repeat family 83 131 IPR002885 -
Apr7g0266 766 Pfam PPR repeat family 284 331 IPR002885 -
Apr7g0266 766 PANTHER BNACNNG15330D PROTEIN 411 512 - -
Apr7g0266 766 PANTHER BNACNNG15330D PROTEIN 28 407 - -
Apr7g0266 766 PANTHER BNACNNG15330D PROTEIN 507 765 - -
Apr7g0266 766 Gene3D Tetratricopeptide repeat domain 644 762 IPR011990 GO:0005515
Apr7g0266 766 PANTHER - 28 407 - -
Apr7g0266 766 PANTHER - 507 765 - -
Apr7g0266 766 PANTHER - 411 512 - -
Apr7g0266 766 TIGRFAM PPR: pentatricopeptide repeat domain 86 120 IPR002885 -
Apr7g0266 766 TIGRFAM PPR: pentatricopeptide repeat domain 592 624 IPR002885 -
Apr7g0266 766 TIGRFAM PPR: pentatricopeptide repeat domain 492 522 IPR002885 -
Apr7g0266 766 TIGRFAM PPR: pentatricopeptide repeat domain 665 686 IPR002885 -
Apr7g0266 766 TIGRFAM PPR: pentatricopeptide repeat domain 288 320 IPR002885 -
Apr7g0266 766 TIGRFAM PPR: pentatricopeptide repeat domain 188 222 IPR002885 -
Apr7g0266 766 SUPERFAMILY TPR-like 659 755 IPR011990 GO:0005515
Apr7g0266 766 Gene3D Tetratricopeptide repeat domain 542 643 IPR011990 GO:0005515
Apr7g0266 766 Gene3D Tetratricopeptide repeat domain 34 133 IPR011990 GO:0005515
Apr7g0266 766 Gene3D Tetratricopeptide repeat domain 405 541 IPR011990 GO:0005515
Apr7g0266 766 Gene3D Tetratricopeptide repeat domain 247 336 IPR011990 GO:0005515
Apr7g0266 766 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 590 624 IPR002885 -
Apr7g0266 766 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -
Apr7g0266 766 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 186 221 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0266 Apr-Chr7 8030431 8032872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0266 91 765 Glycoside Hydrolase AT3G49170 30.725 2.10e-106 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0266 - - gmx:102667531 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0266 7 8030431 8032872 Apr7g0266 7 8030431 8032872 ECH