Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0025 ATGAGTTCGGACTCGTTTCGTTCAGGGAGTTCCTTAGCTCCTAATTCTAAACGAAGTTTCTCTAATGCTACATCTTCCAACCACTCCAACGATAACAGGAACAGGAACAACAACAAGAGGAAGACAACCACCAACCAGAAAACCCTAGGCGTCTCTTGGGGCTCAAATTCTCGGTCCTCTTCTCGAAAATCCGCCTTCTCCGATTTTGGCAGTTATATGATAGAGAAGAACCGGAAACTACACAACCAGTTTGATGCTGAGGCTTCCACGTCTTCGGTTAGTGGCTCTTGTTCTGGGAAGCCTATATTCAGAGGAGTTTCAATTTTTGTTGATGGTTTCACGGTTCCTTCCAGCCAGGAACTGCGGAACTACATGGTAAAGTATGGTGGAAGATTTGAGAACTATTTCTCAAGGCATCGTGTAACACATATCATCTGCAGTAATCTTCCTGATAGTAAAGTTAAGAACCTGAGAGCCTTCAGTGCAGGGTTGCCAGTGGTGAAACCCACTTGGATTTTAGATTCGGTTGCTGCTAGTAGACTCTTGAGCTGGATGCCTTATCAACTTGACCAGCTTCCTAGTAACCAACCAAAACTGTCAGCCTTCTTTGCATTGAAAAGCAGCAAAGTATCAGAGGATGCTTTTACAAGTGCCCTTTGTGACATACAGTCAGACATTGAAGATTCATCTGTGAGAGTTGGCCGATCAGATTCAGAGGATAGACACTCATTCAAAGTTGGGGAGATGGTTGAACTTAGTGTGCAAAGCAGTACTGAATCTGATCATATTGTCCCTGAGAATGCTAACGCAATTATGATAGAAGAGCTGACTAGTGTTGGAGTTAAGTGTGATGAAGAAGAGCATGCAGGAGGAAGCGATACTCATACTAGATATGAGAGAAATGTTGAAAGTGAACTTGAACCTAATCATCAAGAACCTTCTACATCAGTTAGTAATCCTTGTTCTGATGAGCAGAAAGTAAAAGAATTTTCAAGTTCTTTGGCCACTAGGCCTTCTAAACAGTGTCATTCAACTCTTGAAGACCCAAATTTTGTGGAGAATTATTTCAAGAACTCCCGGCTACACTTTATAGGAACCTGGAGAAATCGATATCGAAAGCGTTTTTCCACCTTGTCTACTGGGTTTAACAATGAAAATTCTAATATTAGTGCCTCTGATATTTCTCGTAACTCAGTCATTATCCATGTTGACATGGATTGCTTTTTTGTCTCAGTTGTAATTAGGAACCACCCTGAATTGTTGGACCAGCCTGTAGCTGTGTGTCACTCAAATAATTCAAATGGAACTGCTGAAATTTCCTCTGCAAACTACCCAGCTCGTAGTTATGGTATTCGGGCTGGTATGTTTGTTCGAGATGCCAAGGCTCTTTGTCCTCATCTTGTTATCTTTCCATACAATTTTGAAGCTTATGAGGAAGTAGCTGATCAATTTTATAGTATACTGCATCAGCATTGCAACAGAGTGCAGGCTGTAAGCTGTGATGAAGCATTTTTAGATGTCACTGATTCAGAGGTTAAAGATCCCGAAATTTTAGCTTCATCAATTAGAGAAGAGATCTATAAGACCACTGGATGTACAGCAAGTGCTGGTATAGCTAGAAATATGCTTATGGCTCGAATTGCTACTAGAACTGCAAAACCAAATGATCAATATCACATAACTACAGAACGGGTTGAAGATCATTTATTTCAACTTCCAATTAAAGCACTTCCTGGAATAGGGTATGTTTTACAGGAGAAGTTAAAGAAACAGAATGTTCACACATGTGGACAATTGCGCATGATTTCCAAGTCCTTACTGCAGAAGGACTATGGAATCAAAACAGGAGAAATGCTTTGGAATTATAGCAGAGGAATTGATAACCGGTTAGTTGGGGACTTTCAGGAGAGTAAGTCTATTGGTGCTGATGTAAATTGGGGTGTGAGATTCAAAGATATGAAAGATTGTGAACACTTCCTAATAAACCTTTGCAAGGAAGTCTCCTTGCGATTGCAATGTGGTGGAGTGCAGGGGCGCTCTTTCACTCTCAAGATAAAAAAAAGAAGAAAAGATGCTGATGAACCTGCGAAGTTTATGGGTTGTGGGGATTGTGAAAATTTGAGTCACTCAGTTACGATTCCTCTTGCTACTGATAATGTGGAAGTACTCCAAAGAATAGTAAAACAGTTATTTGGAAGCTTTTACATAGATGTCAAGGAGATTCGAGGTGTTGGCTTGCAAGTTTCCAGACTTGAAAATGCAGAGACTTCTAAGCAAGGTACATCAAAATATAATTTGAAATCGTGGCCCACATTAGGATCGGCAGGTATGGAAAATCAGAAATATCCTATGGGTCATGACCAGCCGAATACGAATGGCACTTCCGGTTGTGGAGGTAGAGATTTGCCAGTGTCTTCAGTTCAAAGGGACAATAAAATATCAAATAATCAAGCAAGTATTAATCCAATTTCCACACCTCCTTTATGTAATCTTGATGTGGATGTTATAAGGAATCTTCCTCCAGAAGTATTTTCAGAATTAAACGAAATTTATGGTGGGAGGTTAATTGATTATGTTGCTAATGGCAAAGGCATGAGTGAGAGTTCTAGCCCTTCAGGAAACTCATTTTTAGAGCAAGAAAACAAGGAAGAGGAACTTTTGTATTCCGAGTCAATTACTAAAAACAAGCTATTATCAGAAAATATGGGAATGCAGCATGAGGCAGAGAGAAGTGAAGCAGTACCAGGCTCAGGGCATGGACCCTATTTCAAGGTTACTCACCATTCAGGTCTTGAAAAAGATGATTTATTTCCGTCTTCTTTGAGCCAAGTCGATGGTTCAGTGTTTCTACAGTTGCCTGAGGATTTGAAAGCTGTCCTTGCTGAGCAGCTTCCTGCACACAGGATGCCAGAGATTTGCTCCATTGTTTCTGGAGTCCCTCCTAGTGAAAACCATCAGATGTCATTAGGTGTCGAACCATCTGAGAATTATCCTGGATCAAGTTACAATGAGTGTCTTTGGGCTGGGAATCCTCCATATTGGGTTGGAAAGTTTAAAGTTAGCAGTTGCGTAATATTAAAGAAACTTGCAGAAATGTATTACAAATCAGGGTTGACTGGCAAATTATCTTCAGTTTTGCACCAAACTATATCTGAATTCTATGAACTAAATCTAGTGCATCAGATTTCTGACGACAATGTTAACATTATGTGTGAGCTACTGAAGCAGTATATAAAAGTGAAAATAGAAAGGGATATTGAAGAGATTTATATTTGTTTTCGGCTTCTGCAAAGGTTTGCAGCCAAGTCCCAATTTTTCCTACAAGTGTATAATAATGTATTTCCTTACCTCCAGGCAGCTGTTGATGACAATTATGGAGGGATTTTGTTTATACCATCATTGTAG 3405 0.3997 MSSDSFRSGSSLAPNSKRSFSNATSSNHSNDNRNRNNNKRKTTTNQKTLGVSWGSNSRSSSRKSAFSDFGSYMIEKNRKLHNQFDAEASTSSVSGSCSGKPIFRGVSIFVDGFTVPSSQELRNYMVKYGGRFENYFSRHRVTHIICSNLPDSKVKNLRAFSAGLPVVKPTWILDSVAASRLLSWMPYQLDQLPSNQPKLSAFFALKSSKVSEDAFTSALCDIQSDIEDSSVRVGRSDSEDRHSFKVGEMVELSVQSSTESDHIVPENANAIMIEELTSVGVKCDEEEHAGGSDTHTRYERNVESELEPNHQEPSTSVSNPCSDEQKVKEFSSSLATRPSKQCHSTLEDPNFVENYFKNSRLHFIGTWRNRYRKRFSTLSTGFNNENSNISASDISRNSVIIHVDMDCFFVSVVIRNHPELLDQPVAVCHSNNSNGTAEISSANYPARSYGIRAGMFVRDAKALCPHLVIFPYNFEAYEEVADQFYSILHQHCNRVQAVSCDEAFLDVTDSEVKDPEILASSIREEIYKTTGCTASAGIARNMLMARIATRTAKPNDQYHITTERVEDHLFQLPIKALPGIGYVLQEKLKKQNVHTCGQLRMISKSLLQKDYGIKTGEMLWNYSRGIDNRLVGDFQESKSIGADVNWGVRFKDMKDCEHFLINLCKEVSLRLQCGGVQGRSFTLKIKKRRKDADEPAKFMGCGDCENLSHSVTIPLATDNVEVLQRIVKQLFGSFYIDVKEIRGVGLQVSRLENAETSKQGTSKYNLKSWPTLGSAGMENQKYPMGHDQPNTNGTSGCGGRDLPVSSVQRDNKISNNQASINPISTPPLCNLDVDVIRNLPPEVFSELNEIYGGRLIDYVANGKGMSESSSPSGNSFLEQENKEEELLYSESITKNKLLSENMGMQHEAERSEAVPGSGHGPYFKVTHHSGLEKDDLFPSSLSQVDGSVFLQLPEDLKAVLAEQLPAHRMPEICSIVSGVPPSENHQMSLGVEPSENYPGSSYNECLWAGNPPYWVGKFKVSSCVILKKLAEMYYKSGLTGKLSSVLHQTISEFYELNLVHQISDDNVNIMCELLKQYIKVKIERDIEEIYICFRLLQRFAAKSQFFLQVYNNVFPYLQAAVDDNYGGILFIPSL* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0025 1134 MobiDBLite consensus disorder prediction 308 343 - -
Apr7g0025 1134 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 636 749 IPR036775 GO:0003684|GO:0006281
Apr7g0025 1134 Gene3D - 417 471 - -
Apr7g0025 1134 Pfam impB/mucB/samB family 403 549 IPR001126 GO:0006281
Apr7g0025 1134 MobiDBLite consensus disorder prediction 286 307 - -
Apr7g0025 1134 Gene3D - 400 561 IPR043128 -
Apr7g0025 1134 MobiDBLite consensus disorder prediction 286 343 - -
Apr7g0025 1134 MobiDBLite consensus disorder prediction 39 63 - -
Apr7g0025 1134 PANTHER DNA REPAIR PROTEIN REV1 40 1127 - -
Apr7g0025 1134 MobiDBLite consensus disorder prediction 1 32 - -
Apr7g0025 1134 PIRSF REV1 12 1126 IPR012112 GO:0003684|GO:0006281|GO:0016779|GO:0042276
Apr7g0025 1134 SMART BRCT_7 100 179 IPR001357 -
Apr7g0025 1134 Gene3D - 572 626 - -
Apr7g0025 1134 ProSiteProfiles UmuC domain profile. 400 581 IPR001126 GO:0006281
Apr7g0025 1134 Gene3D - 636 759 IPR036775 GO:0003684|GO:0006281
Apr7g0025 1134 Pfam BRCA1 C Terminus (BRCT) domain 101 175 IPR001357 -
Apr7g0025 1134 Pfam impB/mucB/samB family C-terminal domain 637 758 IPR017961 GO:0003684|GO:0006281
Apr7g0025 1134 Gene3D BRCT domain 95 189 IPR036420 -
Apr7g0025 1134 MobiDBLite consensus disorder prediction 784 803 - -
Apr7g0025 1134 ProSiteProfiles BRCT domain profile. 98 189 IPR001357 -
Apr7g0025 1134 MobiDBLite consensus disorder prediction 782 803 - -
Apr7g0025 1134 SUPERFAMILY BRCT domain 100 190 IPR036420 -
Apr7g0025 1134 MobiDBLite consensus disorder prediction 1 63 - -
Apr7g0025 1134 CDD PolY_Rev1 351 751 - -
Apr7g0025 1134 CDD BRCT_Rev1 102 189 - -
Apr7g0025 1134 Gene3D - 349 381 - -
Apr7g0025 1134 SUPERFAMILY DNA/RNA polymerases 395 631 IPR043502 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0025 K03515 - gmx:100778409 1743.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0025 7 1478341 1495171 Apr7g0025 7 1478341 1495171 ECH