Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0013 ATGGCTCTCTCTTTCGGCCTCGTCTCTTCCATTCTCGCAGCAGAAACGGCCTCCACTCACACGCTGGCTTTCAGGCCACAAGCGCCTCCTTCAAGGTTGCGCATGGTGCGAGCTGTCACCTCTGCCACCGTCTCTCAGTCTCAACCATCCACCACCAAAATCAGGGGAATCATGAAACCCCGCAAAGTCTCCCCGGAGATGCAAGCCCTCGTCGGCGTTCCTGAGATTTCCCGAACCCAAGCACTCAAACTCATTTGGGCATACATTAAGGACAACAATCTTCAGGACCCTGAAAACAAGAGGGTTATAAAATGTGATGAGACGCTGAAGAAGGTGTTTGCAGGGAGAGATCAAGTTGGTATGCTTGAGATTGCTGGTTTGATTAGTCCTCACTTCCTTAAATGA 405 0.5086 MALSFGLVSSILAAETASTHTLAFRPQAPPSRLRMVRAVTSATVSQSQPSTTKIRGIMKPRKVSPEMQALVGVPEISRTQALKLIWAYIKDNNLQDPENKRVIKCDETLKKVFAGRDQVGMLEIAGLISPHFLK* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0013 134 Gene3D SWIB/MDM2 domain 51 134 IPR036885 -
Apr7g0013 134 PANTHER EXPRESSED PROTEIN-RELATED 14 133 - -
Apr7g0013 134 SUPERFAMILY SWIB/MDM2 domain 51 134 IPR036885 -
Apr7g0013 134 ProSiteProfiles SWIB/MDM2 domain profile. 56 134 IPR003121 -
Apr7g0013 134 SMART swib_2 57 134 IPR019835 -
Apr7g0013 134 Pfam SWIB/MDM2 domain 59 132 IPR003121 -
Apr7g0013 134 CDD SWIB-MDM2_like 61 132 - -
Apr7g0013 134 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 14 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0013 Apr-Chr7 853587 855668 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Apr7g0013 SWIB 5.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0013 - - lja:Lj1g3v0050930.1 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0013 7 853587 855668 Apr7g0013 7 853587 855668 ECH