Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0009 ATGGCTTCCTCTTCTTCTCCGCAGCAAGGTTTAGGTTTGTCCGAAGAAGATTACGACTTAATGTATGGATCGGAATCGGGTTGGGTGGAAGCTAGAAGCTCATGCGGTCACCTGGCATCATTGTCTGGCGATCTTAGCCACATTCCAACCCCTGAAACCCCCTGCCAGAGATGCCAACACCCCACTGAGAACTGGGTGTGTCTGTCGTGTAAGCAAGTCTTGTGTAGCCGTTTTGTGAACAAGCACATGCTCCAACACTTTCGGGACACAAATCATTGCATCGCCCTCAGTTTTAGTGATCTCTCCGTCTGGTGTTTCTCCTGTGACGCTTATTTGGATGCTCAACTAATTCCCCAACTGCGTCCAGTTCATCAACTCGCTTATATATTGAAATTCGGTGTGCCTCCTCCACTCCCAGCAACTCAAGCTTGA 432 0.4907 MASSSSPQQGLGLSEEDYDLMYGSESGWVEARSSCGHLASLSGDLSHIPTPETPCQRCQHPTENWVCLSCKQVLCSRFVNKHMLQHFRDTNHCIALSFSDLSVWCFSCDAYLDAQLIPQLRPVHQLAYILKFGVPPPLPATQA* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0009 143 ProSiteProfiles Zinc finger UBP-type profile. 33 134 IPR001607 GO:0008270
Apr7g0009 143 SUPERFAMILY RING/U-box 33 123 - -
Apr7g0009 143 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 2 140 - -
Apr7g0009 143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 134 IPR013083 -
Apr7g0009 143 Pfam Zn-finger in ubiquitin-hydrolases and other protein 55 113 IPR001607 GO:0008270
Apr7g0009 143 SMART Zf_UBP_1 54 103 IPR001607 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0009 - - var:108319921 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0009 7 799088 800039 Apr7g0009 7 799088 800039 ECH