Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1350 ATGGCCATAAAGGCAATTGAGTTGTTGAAAGGAAGTGCATCCCATGAAGAGATAGTTGAAGTTCTTGAAGCTGTGGCTGCAGATTTGGGAGATGTGATCGATGATGTGAACTCTTTGCAGGCGAAGCCTCTGAAGGGGGCAATGACCAATGAGGTTTATGAGGTAAATTGGCCAACCAAAAATGATGGTCATCAGAGAAGAGTTCTGGTTCGATTATATGGTGAAGGTGTTGAGGTTTTCTTCAACAGGTTGGATGAAATCCAAACCTTTGAGTGCATGTCAAAGCATGGACAGGGTCCTCGCCTTCTTGGGAGGTTCACCACTGGCCGAGTTGAAGAGTTCATTCATGCAAGAACACTCTCTGCTGCTGATCTCCGTGACCCTGAAATATCTGCTTTGATAGCATCTAAGATGAGGGAGTTTCACAATCTTGATATGCCTGGTGCAAGGAAGGCTCAGCTGTGGCAGAGAATGAGGAAGTGGCTTAGTGATGCCAAAAGTTTGTGCTCCCGAAGGGATACCAACAATTTTCGCCTGGACAATCTAGATGCTGAAATAAACATGCTTGAAGAGTTGTTATCTGAAGGAAATCAAGATATTGCTTTTTGTCACAATGACCTACAATACGGTAACATAATGATAGATGAAGAGACAAGAGCAATCACTTTAATTGACTACGAATATGCGAGTTACAATTCTTTTGCATATGATCTGGCAAATCATTTCTGTGAAATGGTGGCCAATTACCATAGTGACGAACCTCATGTTCTTGACTACAGTAAATATCCTGGTCTGGAGGAGCGTCAAAGGTTTATTAATAACTACTTGAGTTCTGAAGATAAGAAACCAAGCAACACTGAAGTGGAGCAGTTAGTGAATCTCGTAGAAAAGTACACTCTTGCAAACCATCTATTTTGGGGCTTGTGGGGACTTATATCGAGTTATGTCAACAAAATTGACTTTAACTACAAGGAGTATGCAAGGCAGAGGTTTCAGCAATACTGGTTAAAGAAGCCTACTTTATTGGACTCGCCAAGTATCATTTATCAAGATGGAATTGCCAATAGTTCACTAGCACCCTTGACATGA 1089 0.4169 MAIKAIELLKGSASHEEIVEVLEAVAADLGDVIDDVNSLQAKPLKGAMTNEVYEVNWPTKNDGHQRRVLVRLYGEGVEVFFNRLDEIQTFECMSKHGQGPRLLGRFTTGRVEEFIHARTLSAADLRDPEISALIASKMREFHNLDMPGARKAQLWQRMRKWLSDAKSLCSRRDTNNFRLDNLDAEINMLEELLSEGNQDIAFCHNDLQYGNIMIDEETRAITLIDYEYASYNSFAYDLANHFCEMVANYHSDEPHVLDYSKYPGLEERQRFINNYLSSEDKKPSNTEVEQLVNLVEKYTLANHLFWGLWGLISSYVNKIDFNYKEYARQRFQQYWLKKPTLLDSPSIIYQDGIANSSLAPLT* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1350 362 SUPERFAMILY Protein kinase-like (PK-like) 35 341 IPR011009 -
Apr6g1350 362 Pfam Choline/ethanolamine kinase 65 266 - -
Apr6g1350 362 PANTHER CHOLINE/ETHANOALAMINE KINASE 2 359 - -
Apr6g1350 362 CDD ETNK_euk 39 335 - -
Apr6g1350 362 Gene3D - 74 335 - -
Apr6g1350 362 PANTHER CHOLINE/ETHANOLAMINE KINASE 2 359 - -
Apr6g1350 362 Coils Coil 179 199 - -
Apr6g1350 362 Gene3D Phosphorylase Kinase; domain 1 37 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1350 Apr-Chr6 19478530 19483492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1350 17 342 Acyl Lipid Metabolism Gene Families AT1G74320 64.724 6.34e-168 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1350 K14156 - gmx:547972 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1350 6 19478530 19483492 Apr6g1350 6 19478530 19483492 ECH
Apr6g1350 6 19478530 19483492 Apr8g2082 8 31362413 31366817 PCT