Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1349 ATGAACAGCAGAAAACTGCAACTTCAACTTCAACTCCAACTCCAACTTCAACTTCAACTTCAACTTCACTTCTCCGTTCCAACACTCGCTATGTTCCTTCTTAAGACATGGAGACAAACAGCTTTTGGAGTTTTTGGCTACCTTAATTTCACCAAAGCTGGTTTCCTCGATCATTCTAAGAGATTCAAACCAGAGGAAATGGAAGTACAATTACCTGGGAAGAATTGCATTGTTACAGGAGCTAACTCTGGAATTGGCTACGCAACAGCAGAGGGTCTTGCCAAGCGTGGTGCAACTGTCTATCTTATATGTCGTAATAAGGATAAAGGAGAGGCTGCTCTATCTGATATTCAAACTAGAACTGGCAATCAAAATGTATATTTGGAGATTTGTGACCTTTCTTCAGTCAATGAGATCAAGTCATTTGCTTCCAGGTTTTCAAGGAAGAATGTGCCAGTTCATGTGTTGGTTAACAATGCTGGCTTGCTTGAGCAAAATCGAGTTACCACATCAGAAGGGTATGAGTTGAACTTTGCTGTAAATGTGTTAGGCACATACACCATGACAGAATTGATGGTACCGTTACTGAAGAAAGCTTCTCCAGATGCACGTGTCATTACAGTTTCTTCTGGTGGAATGTACACTGCTCCCTTAACCAATGATCTACAGTATTCCGAGAGCAACTTTAATGGAGTTGAACAATATGCTCGAAACAAGCGTGTTCAGGTTGCACTAACAGAAAAATGGGCTGACACATACAAGAACAAAGGTATAGGATTTTACTCAATGCACCCAGGTTGGGCTGAGACTCCTGGGGTTGCTAAGAGTTTGCCCAGCTTCTCTAAAACGCTTTCAGGGAAGCTTAGAACAAGTGAAGAAGGTGCGGACACAGTCATCTGGTTGACATTACAACCAAAAGAGAAACTGGTATCAGGAGGAACATACTTCAAGGATACTGATTAG 963 0.4174 MNSRKLQLQLQLQLQLQLQLQLHFSVPTLAMFLLKTWRQTAFGVFGYLNFTKAGFLDHSKRFKPEEMEVQLPGKNCIVTGANSGIGYATAEGLAKRGATVYLICRNKDKGEAALSDIQTRTGNQNVYLEICDLSSVNEIKSFASRFSRKNVPVHVLVNNAGLLEQNRVTTSEGYELNFAVNVLGTYTMTELMVPLLKKASPDARVITVSSGGMYTAPLTNDLQYSESNFNGVEQYARNKRVQVALTEKWADTYKNKGIGFYSMHPGWAETPGVAKSLPSFSKTLSGKLRTSEEGADTVIWLTLQPKEKLVSGGTYFKDTD* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1349 320 PANTHER RETINOL DEHYDROGENASE 37 318 - -
Apr6g1349 320 PRINTS Glucose/ribitol dehydrogenase family signature 75 92 IPR002347 -
Apr6g1349 320 PRINTS Glucose/ribitol dehydrogenase family signature 151 162 IPR002347 -
Apr6g1349 320 PRINTS Glucose/ribitol dehydrogenase family signature 235 254 IPR002347 -
Apr6g1349 320 PRINTS Glucose/ribitol dehydrogenase family signature 256 273 IPR002347 -
Apr6g1349 320 PRINTS Glucose/ribitol dehydrogenase family signature 284 304 IPR002347 -
Apr6g1349 320 Gene3D - 60 320 - -
Apr6g1349 320 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 37 318 - -
Apr6g1349 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 67 318 IPR036291 -
Apr6g1349 320 Pfam short chain dehydrogenase 74 275 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1349 Apr-Chr6 19458104 19466310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1349 71 271 Miscellaneous Gene Families AT2G29340 26.570 5.62e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1349 K11168 - gmx:100775215 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1349 6 19458104 19466310 Apr6g1349 6 19458104 19466310 ECH