Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1319 ATGGCAGAGAAGCGCGTGTATGAAGCATGGAAAGGAAGTAATAAATTCCTATTTGGAGGAAGGTTGATATTTGGACCTGACGCTAGGTCACTACTTGTCACCTTGTTGCTGATCATTGTTCCAGTTATCATCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATCAATTTTCCTCATATAATGCAGGATATGCTATATTGGTGGTGGCTGTTCTGTTCAATATTTATGTGTTGATTCTTCTCTTTCTTACTTCCTCACGTGATCCGGGCGTTATTCCGAGGAATTTACACCCACCCGAGGAAGAGTTCCGTTATGACTCTTCAGTTTCTGTTGATATTGGGGGACGACAGACTCCAAGCCTTCAGTTCCCTAGAACAAAAGAAGTAATGGTCAATGGGCATCCTGTAAGGGTGAAGTATTGTGATACTTGTATGCTTTATCGTCCTCCTCGATGTTCACACTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCACCATTGCCCTTGGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCAGCAACTATTCTATGTATCTATGTGTTTTCCATCTCAGCTTTTTACATCAAGGTTCTGATGGATCATTATAATGGGACAGTCTGGAGGGCAATGAAAGAATCCCCTGCATCTGTAGTATTAATGGGATATTGTTTCATCTCTTTATGGTTTGTTGGTGGACTAACCGGCTTTCATTTGTACCTTATTGGCACAAATCAGACTACCTATGAGAACTTCCGGTACAGAGCTGATAACAGGGTCAATGTCTATAATCGGGGTTGTTTAAATAATTTCCTGGAAGTATTTTGTACGAAAGTGAAGCCATCAAGGAACAATTTCCGAGCTTTTGTTCAAGAGGAGGTACCAAGGCCACCCCCTCCGGTCATTTCGCGAGATCCTGAACCAGATCATGGTGGGGATCCCCGTTCAAAGGTTGAAGATGATCTAGATATCGGTGAAGACCTATTAAAGATATCACAGCGTCGGAATATTGAAGAGATTGATGAGGAAATTCGGAGCAGAGGGAGCAATGGGGCTCCCCATAACATATCTGAAGTTGATTCTGTTTTGGGCTCAGATCGACGAGCTCCAACAATTCGATCTGAAGCAAGGCACTCGAGCGAGGGAAGAACTGGAAGCTGGGAAATTGCACCAGAGGCCCTTGCCAATTCAAATGTAACTGAAAGTAGAAACTATTTTGCAGCAAAGGAAGTGCGACAAAAACTTGGTGGGTCTTTCTGA 1269 0.4279 MAEKRVYEAWKGSNKFLFGGRLIFGPDARSLLVTLLLIIVPVIIFCVFVARHLRHQFSSYNAGYAILVVAVLFNIYVLILLFLTSSRDPGVIPRNLHPPEEEFRYDSSVSVDIGGRQTPSLQFPRTKEVMVNGHPVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWRNYRYFFLFVSSATILCIYVFSISAFYIKVLMDHYNGTVWRAMKESPASVVLMGYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRVNVYNRGCLNNFLEVFCTKVKPSRNNFRAFVQEEVPRPPPPVISRDPEPDHGGDPRSKVEDDLDIGEDLLKISQRRNIEEIDEEIRSRGSNGAPHNISEVDSVLGSDRRAPTIRSEARHSSEGRTGSWEIAPEALANSNVTESRNYFAAKEVRQKLGGSF* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1319 422 MobiDBLite consensus disorder prediction 309 325 - -
Apr6g1319 422 MobiDBLite consensus disorder prediction 293 325 - -
Apr6g1319 422 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 417 - -
Apr6g1319 422 MobiDBLite consensus disorder prediction 347 392 - -
Apr6g1319 422 ProSiteProfiles DHHC domain profile. 139 182 - -
Apr6g1319 422 Pfam DHHC palmitoyltransferase 138 256 IPR001594 GO:0016409
Apr6g1319 422 PANTHER S-ACYLTRANSFERASE 6 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1319 Apr-Chr6 18737955 18755471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1319 65 278 Lipid Metabolism Gene Families AT4G22750 26.496 6.67e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1319 K16675 - gmx:100795934 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1319 6 18737955 18755471 Apr6g1319 6 18737955 18755471 ECH
Apr6g1319 6 18737955 18755471 Apr8g2095 8 31488049 31493012 PCT