Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1318 ATGAATTCCTCAGCATTTTCTTCCTTGTTCTTCGCCCTTTCCTTGATCCTCATTTCTCATGTGCCTTTCCCAACATCAGGCGCCAACTTAATTGAATCTGTATGCAATGATGCGATGGAGGACCAGGTTGCTTGCCTTCAACTTCTCCAATCCGAGCCACGATTCGCCACGGCGAAAAACTATGTTCATCTCTCGAAGATGATCCTTGAGATGGGGGTGAAGAAGGGTGAAAAAGTCCAGAATGAGCTAAAGGAGATGATGATGAAAAACCCTTCACCAGCCATCACACAATGTGCAACTACCCTTTATGATGGGGTGGTTGGATCATTCAAAAGCTCATTGGGAGAAATGAAAGAGGATGGTTTAACAGCAAATTATGATGCAAAAGTTGCTGGTGATGGACCTGCCACATGCGATAGAGCCTTGGCTGCAGCAAACATTGTCAATCCCACAATTTCTGCCCTAAACAAGGAGATCTTGTTGATTAGCAAAATTGCATTTCTGGCCACCAACGAGCTTCCCGAAAGCCCATAA 534 0.4494 MNSSAFSSLFFALSLILISHVPFPTSGANLIESVCNDAMEDQVACLQLLQSEPRFATAKNYVHLSKMILEMGVKKGEKVQNELKEMMMKNPSPAITQCATTLYDGVVGSFKSSLGEMKEDGLTANYDAKVAGDGPATCDRALAAANIVNPTISALNKEILLISKIAFLATNELPESP* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1318 177 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 173 IPR035513 -
Apr6g1318 177 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 173 - -
Apr6g1318 177 PANTHER PECTINESTERASE INHIBITOR DOMAIN-CONTAINING PROTEIN-RELATED 1 173 - -
Apr6g1318 177 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 173 IPR035513 -
Apr6g1318 177 Pfam Plant invertase/pectin methylesterase inhibitor 29 156 IPR006501 GO:0004857
Apr6g1318 177 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1318 Apr-Chr6 18734400 18734933 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1318 - - gmx:102669481 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1318 6 18734400 18734933 Apr6g1318 6 18734400 18734933 ECH
Apr8g2096 8 31493940 31494479 Apr6g1318 6 18734400 18734933 PCT