Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1304 ATGTCTAACTTGCCAGAAGGCGAAGGTAGAGCACCAGCGTCCACCTGGGTTGTTACAGCATCATTGGTGAAGATTATATTTCTGCTGTCAGATGTGAAGCAACCTAGAGATGCTCAAAAAAGCATAAACTTCCATGAGGAGTACCAGAAGGCTTTAAGGACAAAATCCTATGCTGATTTTTTCAACAAGGCTCAATTACTTGCAAGCCAGCCTTCCATTTATTCCAAACAAAATAAATTTTCAGAAATCTTCCTTGAACCAGATCAAGAAACCATACATTCTATTATTAATACAACAATCCTTTCAAAGACACCAGAACTAAAGAATCTCATGCTCAGCTACTTTGACATCAGCGCTGAGGCTTCATTCATTTGCACCCATATTCTCAAAAGCATCAACCAAGTTCAATGTAATTACCAATTCATTCAAAGAGCACTAGACATTATGGATGAAAATAATGACTCTCATGATAAACTCAAACAAATTGGTTTTGAGCTTAACTCATTCATTGTCTCAAATAACCCATTTTCCAATCTTAGCAATCTTGGTTTCAAGCTCATAAGTGATAATAAGTACCCATTAGTTTTGCACCATTTAAAATCAATGAGAAAAAGGGTAGGAAGGAAAATTAAGATAATGAAGTATTTGAAGAAGGCATCAAGAATTTGTGTTGTACTAGCATGTGGCTTAGTGGTTACCACAGCCACAGTTACAACAGCACATACTTCAGTAGCTTTAATCATGGGTCCAGCATTTCTCAGCATTCCATGCGTGAGTATTAAGAGGAAGCTTCCAAGTTCAAGGTTTTCAAGAAGTAAGTTTCTCACTAAACTTTGTGATCAGCTTGACATGGCAGCCAAGGGAACTTACATATTGAATAGAGACTTTGAAACAATGAGTAGGCTAGTAGCTCGGCTTCATGATGACATTGAACATAACAGGGCAATGGTGCAATTCTGTTTGGATAGGAAAGTTGATAAATGCTTTTTGCAAATAGTGAAGGAGCTTCAGAAAAGTGCTGCTGAGTTTAGGAAACAAGTGGAAGAACTTGAAGAACATTTGTACTTGTGCCTTGTGACAATTAACCGAGCAAGAAGTTTGGTTATTAAGGAAATGACAGAAACATGTACAGAAGGCTTCGGACAGTAG 1149 0.376 MSNLPEGEGRAPASTWVVTASLVKIIFLLSDVKQPRDAQKSINFHEEYQKALRTKSYADFFNKAQLLASQPSIYSKQNKFSEIFLEPDQETIHSIINTTILSKTPELKNLMLSYFDISAEASFICTHILKSINQVQCNYQFIQRALDIMDENNDSHDKLKQIGFELNSFIVSNNPFSNLSNLGFKLISDNKYPLVLHHLKSMRKRVGRKIKIMKYLKKASRICVVLACGLVVTTATVTTAHTSVALIMGPAFLSIPCVSIKRKLPSSRFSRSKFLTKLCDQLDMAAKGTYILNRDFETMSRLVARLHDDIEHNRAMVQFCLDRKVDKCFLQIVKELQKSAAEFRKQVEELEEHLYLCLVTINRARSLVIKEMTETCTEGFGQ* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1304 382 Pfam Protein of unknown function (DUF677) 75 370 IPR007749 -
Apr6g1304 382 PANTHER OS04G0423200 PROTEIN 31 378 - -
Apr6g1304 382 Coils Coil 333 353 - -
Apr6g1304 382 PANTHER UPF0496 PROTEIN 3-RELATED 31 378 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1304 Apr-Chr6 18399743 18410442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1304 - - gmx:121173698 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1304 6 18399743 18410442 Apr6g1304 6 18399743 18410442 ECH
Apr6g1304 6 18399743 18410442 Apr8g2105 8 31577216 31578917 PCT