Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1295 ATGCGCACTACCGCAGAATACCAAGGTTCTGTTCTGAATCTTCGTGGAGTTCAGATTCACTCCATGGAAGGTTCAAGCATGGAACAAGAACTTGATATGTTTCAGAGACAAGTAACTGAACGATTCTTGGTGCTATCTTCTGTTGGGAGTGAAGAATTGCTTTCACTCTCATGGGTGAGGAAGCTCCTTGATTCGTTCCTTTGTTGCCAAGAGGAGTTCAGGGTGATTCTCCAGAAGCACAAGGAACATGTGTTGAAAACCCCTTTAGATCGCATGGTGGCTGAGTTTTTTGAGCGGAGTGTGAAGGCACTTGATGTGTGCAACGCGATCCGTGATGGGGTTGAACAGATTAGGCAATGGCAGAAGCAGTTGGAGATTGTTCTTTGTGCATTGGACCACAAGAGGAGCATTGGTGAAGGCCAATTTCGCCGTGCCAAGAAGGCACTTGTTGATTTGGCCATTGCCATGCTTGATGATAAGGACTCTAATAGTTCTATAGCGCATAGAAACAGGTCATTTGGTAGAAACAATGGTTCCAAGGATCATCACCATAATAACCATCAAAGCAATAGCTTTAGTCATTTTAGATCACTTTCTTGGAGTGTGTCAAGGAATTGGTCTGCTGCTAGGCAGCTCCAAGCAATTGGGAACAACTTGGTTCCTCCTAAGACTAATGATCTTGTGGCCACTAACGGCCTTGCATTGCCTGTTTATACAATGAGTTGCATCCTGGTTTTTGTGATTTGGGCCCTTGTGGCTGCAATTCCCTGCCAGGACCGCGGGTTGCACCTCCATTTTTCGGTTTCACGGCAGTTTTCGTGGGCTGCCCCGGTGACCTCGCTCCACGAGCGGATCTTGGAGGAGTCCAAGAAGAGGGAGAGGAAGAACTCTTGTGGCTTGTTGAGGGAGATTCAGAAGATTGAGAAGTGTGCTAGGGTGATCAATGAGTTGGCTGATTCAGTGCAGTTTCCTTTGAGTGAGGAGAAAGGAGAGGAGATTAGGCTCAGAGTGCAAGATGTTTCGCGTGTTTGCGAAGCATTGAAGGATGGATTGGACCCTTTGGAACGCCAAGTTAGGGAGGTGTTCCATAGAATTGTGCGAAGCCGAACTGAGGGGCTTGACTCTCATGGTCGAGGGTAA 1140 0.4737 MRTTAEYQGSVLNLRGVQIHSMEGSSMEQELDMFQRQVTERFLVLSSVGSEELLSLSWVRKLLDSFLCCQEEFRVILQKHKEHVLKTPLDRMVAEFFERSVKALDVCNAIRDGVEQIRQWQKQLEIVLCALDHKRSIGEGQFRRAKKALVDLAIAMLDDKDSNSSIAHRNRSFGRNNGSKDHHHNNHQSNSFSHFRSLSWSVSRNWSAARQLQAIGNNLVPPKTNDLVATNGLALPVYTMSCILVFVIWALVAAIPCQDRGLHLHFSVSRQFSWAAPVTSLHERILEESKKRERKNSCGLLREIQKIEKCARVINELADSVQFPLSEEKGEEIRLRVQDVSRVCEALKDGLDPLERQVREVFHRIVRSRTEGLDSHGRG* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1295 379 Pfam Protein ROH1-like 6 375 IPR008511 -
Apr6g1295 379 MobiDBLite consensus disorder prediction 174 188 - -
Apr6g1295 379 PANTHER PLANT/F1M20-13 PROTEIN 1 378 - -
Apr6g1295 379 MobiDBLite consensus disorder prediction 165 191 - -
Apr6g1295 379 PANTHER BPS1-LIKE PROTEIN 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1295 Apr-Chr6 18274344 18276422 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1295 - - gmx:100776285 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1295 6 18274344 18276422 Apr6g1295 6 18274344 18276422 ECH
Apr6g1295 6 18274344 18276422 Apr8g2112 8 31619227 31622481 PCT