Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1281 ATGGCGGATCGTGAAGACGAGGATTTGCAAATGGCGATTCGGATGAGCATGCAGCACTCGATGCCGGAGCCGAAGCGGAGCAAACCGAGGGACTCCGTTACCGGCGGTGTCGTTTCGGGGTCAGCGGAGGAGTCGCCGGAGGCGAAGTCCCGGCGGTTGCAGCGGGAGCTCATGGCTGCTGCTGCTGAGAAGCGGATGGCGGCAGTGTCGGCGGGTAAAGGTGGCGGAGAGGTTGGGAGGAGAGAGATGAAGGAGGAGGAGCGTTTCGATGGTGGGAGCTGGATGAGTAAGGAGCTTTCTCTGCAAGAAGTGAATGAGTTGTTTGGGGTGGTGTTTGGCAGTGAGGTCTCAAAGGGGATTCTAGCACAGTGGAGCAATCAGGGAATAAGGTTTAGCTCTGATCCAGAAACATCCTTGGGCCTAGTGCAGCATGAGGGTGGACCATGTGGCGTTTTGGCGGCTATACAAGCATTTGTGCTCAAATACATTCTTTTCTTTCGAGATGAGGTGAAAGATGTATTAAGCCTGCCACTAAACCAGGGACCGAGCACATTGTTCAATAGTCAATCTTTTCCATCAAATAATTTTTCTTCACTCACTGAAGGTGTAAAAGTAAGTGCCCTTGTAAAAAGCATGGGTGAAATATTATTTATGTGTGGAAATAATGAAAGGGCTGTGATTGCAACCTTGAACATTCTTGTGGATGACATTCAGCATTCTGAAGAAGTTTCAAAGGATGAGGTTATTACAAAAGCACTTGAAGGTCTTGCCATTGAATCAGCCTTGGATCTGCAAAAGGTTCTTAGAGTTGAAACATACACATCGCAACCAAGTGCATTGAAAAGACTTGAAGCAGTGATTCCCTTATTCCAAAGTCGTATGGGGGCATTACTTTTCCTGATCTCTGCTTTACTTTCTCGAGGACTGGACGCGGTTCAAAATGACAGGGATGATCCCAGCCTACCTTTGGTTACTGCTCCTTTTGGGCATGCCTCTCAGGAAATTGTAAATTTACTGCTCTGTGGGCAAGCTGTCCCTAATGTCTTTGATGGGAGGATGGATTTAGGTGGAGGAATGTTTCTGAAAGGTATATCCCAATATGTGGAAGTTGGATTTCTCACGTTGCTAGAGTCTCTGAATTTTTGTAAGGTTGGTCAGTTTTTGAAATGCCCAAAGTGGCCTATATGGGTTGTTGGCAGTGAATCCCATTACACAGTACTGTTTGCCCTTGACACTAGTGTTCAAAATGAGAATGAACTGGAAGAGAGGGAATCACAGATTCGCAAAGCTTTTGATGCACAAGATCAGAGTGGAGGTGGTGGTTTCATTAGTGTGGATGGATTCCATCAAGTTCTTAGAGAAACAAATATCAAACTTCCACAAGAGAAGCTTGAGCACCTTTGCAGTACAGGTTTCATTGTATGGAGTGAGTTTTGGCAGGTCATTTTGGATCTGGACAAGAGCTCAGGAGGTTTGAAGGATTCATCAGGTTTGATGGGTAAAAAAATCTTTGATCTTTACCATTTTAATGGGATTGCTAAATCAGATCTGAATGGCAGTCAAGTAAACTCTAGGGGTGAAACTCCATTACAAAGACCTAGGCTCACAAAATTGACTGTTTCCGTCCCCCCAAGGTGGACGCCTGAGGAATTTATGGCAGATGTGACAGTTTCCTCGGCATCTAGTGCAAATGAATCTACAGGGAAGGACAATGCAGTAATTAAACCTGAGCCTTCTCAGCATGCTCCTTTAGTAGATTGCATAAGGACACGCTGGCCCCGTGCTGTCTGCAGCTGGTCAGGGGATCCTCCTAGTATAGTCTGA 1824 0.4611 MADREDEDLQMAIRMSMQHSMPEPKRSKPRDSVTGGVVSGSAEESPEAKSRRLQRELMAAAAEKRMAAVSAGKGGGEVGRREMKEEERFDGGSWMSKELSLQEVNELFGVVFGSEVSKGILAQWSNQGIRFSSDPETSLGLVQHEGGPCGVLAAIQAFVLKYILFFRDEVKDVLSLPLNQGPSTLFNSQSFPSNNFSSLTEGVKVSALVKSMGEILFMCGNNERAVIATLNILVDDIQHSEEVSKDEVITKALEGLAIESALDLQKVLRVETYTSQPSALKRLEAVIPLFQSRMGALLFLISALLSRGLDAVQNDRDDPSLPLVTAPFGHASQEIVNLLLCGQAVPNVFDGRMDLGGGMFLKGISQYVEVGFLTLLESLNFCKVGQFLKCPKWPIWVVGSESHYTVLFALDTSVQNENELEERESQIRKAFDAQDQSGGGGFISVDGFHQVLRETNIKLPQEKLEHLCSTGFIVWSEFWQVILDLDKSSGGLKDSSGLMGKKIFDLYHFNGIAKSDLNGSQVNSRGETPLQRPRLTKLTVSVPPRWTPEEFMADVTVSSASSANESTGKDNAVIKPEPSQHAPLVDCIRTRWPRAVCSWSGDPPSIV* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1281 607 SUPERFAMILY EF-hand 421 483 IPR011992 -
Apr6g1281 607 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 110 422 IPR025257 -
Apr6g1281 607 SMART DUF4205_3 108 484 IPR025257 -
Apr6g1281 607 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 4 18 IPR003903 -
Apr6g1281 607 SMART uim 4 23 IPR003903 -
Apr6g1281 607 MobiDBLite consensus disorder prediction 1 54 - -
Apr6g1281 607 PANTHER UNCHARACTERIZED 3 606 IPR039785 GO:0004843|GO:0071108|GO:1990380
Apr6g1281 607 Gene3D - 403 489 - -
Apr6g1281 607 MobiDBLite consensus disorder prediction 557 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1281 Apr-Chr6 17712117 17731709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1281 K22647 - gmx:100815405 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1281 6 17712117 17731709 Apr6g1281 6 17712117 17731709 ECH