Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1164 ATGGAAATTGAGCGATGCCAACCAGTGGTAGCTAAAAAGCTATGGAACATAATACGCATAGTGTTCTTAATGTTGAGAAAAGGCATAGCGAAGAGCAAAGTAGCGTTTGATTTCAACGTATTAATCAAACGTGGCAAACTCGCCGCGGGTAAGGCCATAGCAAACACACTCACACTCCACCAGAGATCACGAAACGACGTCGTTTACCCTCGTGACTACGAGTTCAGCTGCAGTAATAGTCCCGCTTTTCCCTTTCACAAACGGAAGCATTATCACTATCATCATTGTCACCGCTACGACGACGTTTCCGCTATTGCGGTTCAGAAGGTTCTTGAGATGCTGAACAACAACAAGGTGGAGGCTTCACCGTTGGTTACATTGCCAGGGTTTGGAAAGAGTCCAATTGGGAAGCAACTTAGAATCACCGATTCACCCTTTCCTTTGAAGGAGGAAGAAGTGGACAACCAAGTTGACGTGGCAGCTGAGGAATTTATTAAGAGGTTCTATAAGGATCTTAATTTGCAACACAAATTGTTGGCTTCTATCGACTCACCTAGTTACCATTATAATTCATGGGATAGATGA 585 0.4393 MEIERCQPVVAKKLWNIIRIVFLMLRKGIAKSKVAFDFNVLIKRGKLAAGKAIANTLTLHQRSRNDVVYPRDYEFSCSNSPAFPFHKRKHYHYHHCHRYDDVSAIAVQKVLEMLNNNKVEASPLVTLPGFGKSPIGKQLRITDSPFPLKEEEVDNQVDVAAEEFIKRFYKDLNLQHKLLASIDSPSYHYNSWDR* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1164 194 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 7 194 - -
Apr6g1164 194 Pfam Cotton fibre expressed protein 154 175 IPR008480 -
Apr6g1164 194 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 7 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1164 Apr-Chr6 16292372 16293198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1164 - - gmx:100783043 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1385 2 19961992 19962814 Apr6g1164 6 16292372 16293198 PCT