Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1089 ATGATGCAACGGTTGGTTGATCACGCTCTTGCTGTAACCAAAGAGTCTGTGAAGGCATTTACTTACGAGACCTTAAACAATATTGTGAGGCTAATCAATGGAGTATCTGCCCTTCTGTTGGCATTTCTACCTGGCAAAGCTAATATACTTGAAGGTATTCATGGTTGGGAACTCAGGCCAACTTTCCGTGGACCACGTTTTCCCCGTTGGATGGAGAATGGTGTGTCCTCTTTCAACCAGTTCATCCATGAACTTTCTGTGGATTCTGATAATTCAAGCCCTGAATACTCATCTGGAGAAGAAGACACTGATACATATACTGATGAATATGAATACCCTCCATCTCCTGCGCCTCAGAGTTCTAGAACCGCAGAAGGTGGTTTTACCAAATACAGTAGGCATAAGATGGATTGGATCCAGTATATCTTACTTTGGATTTTGTTTCCTGTAAAGTTATTGCTGCGCATTCCATTTCTTCTTTTCCACTTAGCTTATTCTAGGGTGTCAAAAGCCATGTCTACCTCTGGAAATAAGCGCCCATCACATTTACATGCACATAAGAGGATGCAAAGCCTCAAGGATCATATTATCCACCGTGCTACTGATAGGAGACGTGGAGTTGTAGAGGATCTTCATCTAGGCACAGAGTTATGTATAGAAGCTGTCTTTGATGTTGTTCACAAGGCAGCACATCTTCTTCTTTCCCCATCAAAAGCTTTTGGGACATTATTCAGGTTGTTTTCATCTCATGAAAGTGGTGTTAAAGAAGATTGTGACGGTGTAGAGAATGTTTCCATTTCTACTGCTACACTAGGAGAGAATGACCCAAAACCTACAGAGAGGAATATCAAGTATCAGCCTTTGAATACAGATGCCCGGACATGTCAGGATGTCATAACAGATCTTGGGTATCCATACGAAGCCATTCATGTGATAACTGCCGATGGATATATTCTTCTTTTGGAAAGAATACCTAGGCGAGATTCAAGGAAAGCTGTTTATCTTCAGCATGGCGTTTTGGATTCATCAATGGGGTTCAGTTGGGTATCTAATGGTATTGTTGGCTCTCCTGCTTTTGCAGCCTATGACCAAGGATATGATGTATTTCTAGGGAATTTCCGAGGTTTGGTTTCTCGGGAACATGTCAACAAGAACATATCATCACGTCAATATTGGAGGTACTCCATCAATGAGCATGGGACAAAGGATATTCCTGCTATGATAGAGAAAATCCATGAAGTAAAAACGGCTGAATTGAGTCTTAGTAAACCTGATATTGAGGAGGAAACTATTGATGATCAGCCTTACAAGCTTTGTGCAATTTGCCATAGTTTGGGAGGAGCTGCTATGATGATGTATGTTATTACACAAAGGATAGAAGGGAAGCCCCATAGACTTTCAAGATTGATTTTACTATCGCCGGCTGGTTTTCATGATGACTCTAACATGGTATTTTCTGCGGCGGACCTACTATTAGTTATACTGGCTCCTGTTTTGTCTCTTCTTGTGCCTGCATTCTATATACCAACCAGATTTTTTCGTATGCTTGTCAATAAGCTAGCTCGGGATCTGCATAACCTACCTGCAGTTGGAGGACTGGTTCAAACTTTAATGAGTTATGTTGTTGGTGGAGACAGCTCAAATTGGGTGGGAGTTTTAGGATTACCACACTACAACATGAATGACATGCCAGGAGTATCTTTCCGTGTTGCTCTCCATCTTGCGCAGATGAAGCGTACTGCAAGATTTAGAATGTTTGATTATGGGAGTGCATCTGCTAACATGGAGGTGTATGGTTCAACTGTGCCTTTGGACTTGGGTGAGCACTATGGACTCATTGACATTCCTGTTGATCTTGTTGCTGGACAGAAGGACAAGGTGATAAGGCCTTCAATGGTAAAACGGCACTATAAATTGATGAAGGGTGCTGGGGTAGATGTTTCATATAATGAGTTTGAATATGCGCATTTGGACTTCACCTTCTCCCACCGTGAAGAACTCTTGTCATATGTTATGTCTCGTTTGCTGACTGTGGATCCTAATCCAAAGCATCATTTGAATGAAAAGGCTGTTGTGAGGCCAAAGAAGAAAGGACAAGTTGCAGCTAGCGGGTAG 2115 0.4199 MMQRLVDHALAVTKESVKAFTYETLNNIVRLINGVSALLLAFLPGKANILEGIHGWELRPTFRGPRFPRWMENGVSSFNQFIHELSVDSDNSSPEYSSGEEDTDTYTDEYEYPPSPAPQSSRTAEGGFTKYSRHKMDWIQYILLWILFPVKLLLRIPFLLFHLAYSRVSKAMSTSGNKRPSHLHAHKRMQSLKDHIIHRATDRRRGVVEDLHLGTELCIEAVFDVVHKAAHLLLSPSKAFGTLFRLFSSHESGVKEDCDGVENVSISTATLGENDPKPTERNIKYQPLNTDARTCQDVITDLGYPYEAIHVITADGYILLLERIPRRDSRKAVYLQHGVLDSSMGFSWVSNGIVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSRQYWRYSINEHGTKDIPAMIEKIHEVKTAELSLSKPDIEEETIDDQPYKLCAICHSLGGAAMMMYVITQRIEGKPHRLSRLILLSPAGFHDDSNMVFSAADLLLVILAPVLSLLVPAFYIPTRFFRMLVNKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPGVSFRVALHLAQMKRTARFRMFDYGSASANMEVYGSTVPLDLGEHYGLIDIPVDLVAGQKDKVIRPSMVKRHYKLMKGAGVDVSYNEFEYAHLDFTFSHREELLSYVMSRLLTVDPNPKHHLNEKAVVRPKKKGQVAASG* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1089 704 PANTHER LYSOSOMAL ACID LIPASE-RELATED 9 686 - -
Apr6g1089 704 MobiDBLite consensus disorder prediction 88 125 - -
Apr6g1089 704 Pfam Partial alpha/beta-hydrolase lipase region 296 351 IPR006693 GO:0006629
Apr6g1089 704 Gene3D alpha/beta hydrolase 285 676 IPR029058 -
Apr6g1089 704 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 9 686 - -
Apr6g1089 704 SUPERFAMILY alpha/beta-Hydrolases 293 672 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1089 Apr-Chr6 15562192 15568772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1089 2 681 Lipid Metabolism Gene Families AT1G18460 67.982 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1089 - - gmx:100785512 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1089 6 15562192 15568772 Apr6g1089 6 15562192 15568772 ECH
Apr2g1438 2 20430877 20435210 Apr6g1089 6 15562192 15568772 PCT