Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1088 ATGGAAGCTGCATTATACACTCCATTTGCTCTTTCACCCAACCAAGTATTCAATGCGGCGAATTATGGAGATAAAAATTTTCCTTTGAAATATAGCAGAGATCGGAGTGTTGTAATGGCAGTGGCAACCCCTGGAATATTAGGGAAAGGTGGTGGGTTGTTGGAGAGGCCAACCATAGAGACAACATCTCCTGGTCGGGAATCTGAATTTGATTTAAGGAAATCGCGAAAAATGGCACCGCCTTATCGAGTGTTGCTGCACAATGATGACTACAACAAGAGGGAATATGTGGTGAAAGTGCTGATGAAGGTGATACCAGGAATGACACTTGATAATGCAGTTAACATAATGCAGGAGGCACATTGTAATGGACTTGCAGTGGTGATCATTTGTACTCAAGTGGATGCTGAAGATCACTGCATGCAGTTAAGAGGAAATGGCCTTTTAAGTTCAATTGAGCCTGTTGATGGTGGGTGTTGA 480 0.4292 MEAALYTPFALSPNQVFNAANYGDKNFPLKYSRDRSVVMAVATPGILGKGGGLLERPTIETTSPGRESEFDLRKSRKMAPPYRVLLHNDDYNKREYVVKVLMKVIPGMTLDNAVNIMQEAHCNGLAVVIICTQVDAEDHCMQLRGNGLLSSIEPVDGGC* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1088 159 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS 1 159 - -
Apr6g1088 159 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 159 IPR022935 GO:0006508
Apr6g1088 159 Hamap ATP-dependent Clp protease adapter protein ClpS [clpS]. 63 156 IPR022935 GO:0006508
Apr6g1088 159 Pfam ATP-dependent Clp protease adaptor protein ClpS 79 145 IPR003769 GO:0030163
Apr6g1088 159 Gene3D - 76 154 IPR014719 -
Apr6g1088 159 SUPERFAMILY ClpS-like 76 153 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1088 Apr-Chr6 15557784 15560382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1088 K06891 - gmx:100306117 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1088 6 15557784 15560382 Apr6g1088 6 15557784 15560382 ECH