Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1086 ATGGAGGCTCCGGCAAGTGGATCCGGATCCGGACCCGACAGGGACAAATCAAACTCTTCCTCCTCTTCTCCGATCTCCGTCGTCTCTGCCATCTGGAAAGATTTTGAGTTGGAGAGGGAGAAATCTATACTGGATGAACAAGGGCTTCGTATTGCAGAGAATCAGGAAAACAGTCAGAAAAATAGGCGCAAGCTTGCAGAGAACACTAGAGACTTCAAAAAAGCTTCGCCAGAGGAGAAGTTAAGTTTGTTCAATACCTTGCTTAAGGGTTATCAGGAAGAGGTTGATAATCTAACTAAGAGAGCAAAATTTGGAGAAAATGCTTTTCTCAACATCTATCAAAAGCTCTATGAAGCTCCAGATCCTTATCCAGCTCTTGCATCAATTGCTGAGCAAGATCTCAAGTTATCTGAGCTTGAATCTGAAAACCGTAAAATGAAAGTTGAGCTTGAGGAGTTCAGGACAGAGGCAACTCACTTGAAGAATCAGCAGGCTACAATACGAAGACTTGAAGAGAGAAATAGACAATTAGAGCAGCAGATGGAAGAGAAAGTGAAAGAATTTGTGGAGATTAAGCAACGCAGTCTGGCAGAAGAGAACCAGAAAACGATGGAAGTTTTGAAAGAAAGGGAACAAGCACTTCAAGACCAGTTGCAGCATGCCAAAGAAAGTGTTTCCAATATGCAGAAATTGCATGAACTCGCACAAAACCAGTTATTTGAACTTCGTGCCCAATCTGATGAAGAGAGGGCAGCTAAGCAATCAGAGGTCAATCTTCTGATGGATGAAGTGGAGCGAGCACAATCAATGCTTCTTAGTTTGGAAAGAGAGAAGGGGGTTCTTCGATCTCAGTTACAAACAGCAAATGAAGAGACTGAAATTAAGAAAAGTGATAATTTTGACTCAAACAGTGCACTTGAAAATTCTTTAAATGCCAAAGAAAAGCTAATCTCCGAGTTGAACATGGAACTGCACAATGTTGAAACAGCCTTATCAAATGAAAGAGAGGAACACGTGAATGAAGTCAAGAAACTTACTGCAATGCTCAATGAAAAGGAGGCTTCTCTTGACGAGATGAAGAAAGAACTTCAAGCGAGGCCAACAGAAAAAATGGTTGATGATCTGCGCAAGAAAGTTAAAATTTTGCAGGCAGTGGGTTATAACTCAATTGAGGCTGAAGACTGGGAAGTTGCTACGAGTGGGGAAGAGATGAGCAAGATGGAGTCTCTTCTTCTTGATAAGAACCGAAAAATGGAACACGAACTAACGCAGTTGAAGGTCACGCTTTCTGAGAAGACATCCTTACTGCAAACAGCAGAACAGAAGATAGCAGAACTTACGATGAAGGTTAATGAACAACAAAAATTGATACAGAAGTTGGAAGATGATATATTGAAGGGATATAGTTCCAATTCAAAAGACCGTAAAGGGAACTTCCTTGATGACTGGGATCTTTCAGAAGCTGGTGGAGGTGAGACTTCTGAGAATACAGCAGAGCAAAGGCAAGTATCCTTAGACCAAGATCAGAGTTCAATGCTTAAAGTGATCTGTAATCAGAGAGATCGATTTAGGACACGCTTGCGAGAGACAGAAGAGGAAATAAGGCAGTTGAAGGAGAAGATTGGGGCATTAACAGTGGAACTGGAAAATACCAAAGCTGATAACGTCAAACTATATGGGAAGATTCGTTATGTACAAGATTACAATCTTGAGAAAGTGGTTTCTAGGGGTTCTAAAAAGTATGCAGAAGATCTTGAAAGTGGTTTCACGTCGGATGTTGAATCTAAATACAAGAAGATATACGAGGATGATATAAATCCTTTTGCTGCATTCTCGAAAAAGGAAAGGGATCAAAGATACAAGGAGTTGGGATTCAGGGACAGAATTACACTCAGCAGTGGACGTTTTCTCCTTGGTAACAAGTATGCCCGGACTTTTGCATTCTTTTATACCATTGGATTGCATATCTTGGTCTTCACTTGTCTCTACCGAATGTCTGCTCTCAGTTATCTTAGTAATGGGCCAGAGGAATCCCTGATTGGAGAGAGAAATATTGATCTTCCACGAGCACCGTAA 2076 0.4114 MEAPASGSGSGPDRDKSNSSSSSPISVVSAIWKDFELEREKSILDEQGLRIAENQENSQKNRRKLAENTRDFKKASPEEKLSLFNTLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALASIAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERNRQLEQQMEEKVKEFVEIKQRSLAEENQKTMEVLKEREQALQDQLQHAKESVSNMQKLHELAQNQLFELRAQSDEERAAKQSEVNLLMDEVERAQSMLLSLEREKGVLRSQLQTANEETEIKKSDNFDSNSALENSLNAKEKLISELNMELHNVETALSNEREEHVNEVKKLTAMLNEKEASLDEMKKELQARPTEKMVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQLKVTLSEKTSLLQTAEQKIAELTMKVNEQQKLIQKLEDDILKGYSSNSKDRKGNFLDDWDLSEAGGGETSENTAEQRQVSLDQDQSSMLKVICNQRDRFRTRLRETEEEIRQLKEKIGALTVELENTKADNVKLYGKIRYVQDYNLEKVVSRGSKKYAEDLESGFTSDVESKYKKIYEDDINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHILVFTCLYRMSALSYLSNGPEESLIGERNIDLPRAP* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1086 691 MobiDBLite consensus disorder prediction 56 72 - -
Apr6g1086 691 Coils Coil 49 69 - -
Apr6g1086 691 MobiDBLite consensus disorder prediction 1 25 - -
Apr6g1086 691 MobiDBLite consensus disorder prediction 47 72 - -
Apr6g1086 691 MobiDBLite consensus disorder prediction 490 506 - -
Apr6g1086 691 MobiDBLite consensus disorder prediction 479 506 - -
Apr6g1086 691 Pfam CASP C terminal 438 668 IPR012955 GO:0006891|GO:0030173
Apr6g1086 691 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 24 676 - -
Apr6g1086 691 Coils Coil 257 291 - -
Apr6g1086 691 Coils Coil 129 194 - -
Apr6g1086 691 MobiDBLite consensus disorder prediction 11 25 - -
Apr6g1086 691 PANTHER HOMEOBOX PROTEIN CUT 24 676 - -
Apr6g1086 691 Coils Coil 197 245 - -
Apr6g1086 691 Coils Coil 303 362 - -
Apr6g1086 691 Coils Coil 422 463 - -
Apr6g1086 691 Coils Coil 81 108 - -
Apr6g1086 691 Coils Coil 513 554 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1086 K09313 - gmx:100780863 1227.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1086 6 15528324 15540674 Apr6g1086 6 15528324 15540674 ECH