Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1065 ATGCCATGTTCTAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGCCTCAAGCTCTTTCCATCTTCTCTTCCTCTTCATCTTCTTCTCTTCCATTTTGCTCATCAAGTTATTAAGCTTAATTGGAAGCTACACCATATTCCAAAGAGATCAACACTATGAGTATGTGTCTTCTGAGTATGATGATGAAGAAGAAGAAATTCAAGAGAGTTACTCTTATGACCATGATTCTATTGAGAGAGATCATCTAGTAGCTGACATCATTTGTGGTGGAGAAACCCTTTTGTTTCTTCACAACAACCACCCTCAAAGTACTCATTCTTCTTCTGAAGAATTCATAACACCACAGAATAGCCTTATTGAAGAAACAGAAGAAAACTATTCCACAGAAACTTTGTCTCTTCACAAGTCACCTGTGGTTTCAGACTTTGAAAATGAAGAGGAAGAAGGAGAAGAAGAATTTCCAGCAGAAGATGCTGATTCTGTTCCAAATTTTGTCCAAGTTGAAAGCAGGCCCACATCACCCATCACACTGAACCTCAGCAAAAGTCATGACTTGGTGGACAGTGACAAAAACTATGACGAAGATCATGTTGATGTTGGACTTGTTGAAAATAAGAAAGTGCAAGAGACAAACCTCACAAGAGATGAGAGATTCCTTGTCTTTGCTCCTACCCAATTAGAGACTAAGAAGTTCATTGTTGAAGAAAATAAGGATGATGAAGAAATATATGGTGACTCATGCACTGTTGGGTCCACTTCTAAGAGCTCCTCTGAATGGAGGAGCTCCATTAATTGCAGGGATTCTGGAACTGAAGACCCTTTTTCTTCATCATCAAGAAGAAGTTGCCCCAAATGGGAATCATATACAGTTTTCCAAAAATATGATGAAGATATGTCATTCCTTGACAGGATTAGCGCACAGAAACTTCATGAAACTGAGTCTTTAAGATCTATCAAGGTATCTCCAAGATCAATTTCAGAGCGTATAGTGTACAAGTTTTCAACTATGAATAAAAAATCAACGGATATACGTCAGAATCCATATCGTGAATTGGAGGCTGCATATGTTGCACAAATTTGCTTAACATGGGAAGCTCTTAATTGGAACTACAAGAATTTTCAATCCAAAAGAGCCTCACGAGGGCATGATGTTGATTTGGGTTGTCCAGCAACCATAGCACAGAAATTCCAACAATTTCAAGTGCTGTTGCAGAGATACGTAGAGAATGAACCTTATGAACATGGCAGGAGACCTGAGATCTACGCTAGAATGAGGCATTTGGCTCCAAAATTACTCCTCGTGCCAGAATATCGAGAATCAGATGATGATCAGAGGGACGATAATGGGTTTCACTCAAAAATATCAACAGCTTCATTTCTTATAATAATGGAAGATGGGATCAGAACGTTCATGAGTTTCCTCAAGGCTGATAAAGAGAAGCCATGTCAGGTCCTGGCAGCTTACTTTAGGAGAAATAAAAAACCTTCGGTTGATCCAACACTTCTACGCCTTATCAAGAAAGTTAATCAAAAGAAGAAAATAAAGGTTAAGGATCTTCGCCGTTCACGCAAATGTTTGAGAAAGAGAAAGTTGAAGGTGGAAGAAGAAATGGAGATTTTGATGGCACTAATAGACTTGAAAGTGGTGTCAAGGGTTCTGAGAATGAGTGAGTTAAGTGAAGAACAGTTGCATTGGTGTGAAGAGAAAATGAGCAAAGTGAGAGTGGTGGATGGAAAACTTCAAAGAGAATCCACTCCACTTTTTTTCCCTGCACATTGA 1782 0.3889 MPCSKEEALVRLFYNASSSFHLLFLFIFFSSILLIKLLSLIGSYTIFQRDQHYEYVSSEYDDEEEEIQESYSYDHDSIERDHLVADIICGGETLLFLHNNHPQSTHSSSEEFITPQNSLIEETEENYSTETLSLHKSPVVSDFENEEEEGEEEFPAEDADSVPNFVQVESRPTSPITLNLSKSHDLVDSDKNYDEDHVDVGLVENKKVQETNLTRDERFLVFAPTQLETKKFIVEENKDDEEIYGDSCTVGSTSKSSSEWRSSINCRDSGTEDPFSSSSRRSCPKWESYTVFQKYDEDMSFLDRISAQKLHETESLRSIKVSPRSISERIVYKFSTMNKKSTDIRQNPYRELEAAYVAQICLTWEALNWNYKNFQSKRASRGHDVDLGCPATIAQKFQQFQVLLQRYVENEPYEHGRRPEIYARMRHLAPKLLLVPEYRESDDDQRDDNGFHSKISTASFLIIMEDGIRTFMSFLKADKEKPCQVLAAYFRRNKKPSVDPTLLRLIKKVNQKKKIKVKDLRRSRKCLRKRKLKVEEEMEILMALIDLKVVSRVLRMSELSEEQLHWCEEKMSKVRVVDGKLQRESTPLFFPAH* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1065 593 Coils Coil 510 537 - -
Apr6g1065 593 Pfam Protein of unknown function (DUF1666) 351 591 IPR012870 -
Apr6g1065 593 MobiDBLite consensus disorder prediction 247 282 - -
Apr6g1065 593 MobiDBLite consensus disorder prediction 244 282 - -
Apr6g1065 593 PANTHER DNA LIGASE (DUF1666)-RELATED 1 593 - -
Apr6g1065 593 PANTHER DUF1666 FAMILY PROTEIN 1 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1065 Apr-Chr6 15334318 15338896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1065 - - gsj:114425724 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1065 6 15334318 15338896 Apr6g1065 6 15334318 15338896 ECH
Apr2g1452 2 20586852 20590137 Apr6g1065 6 15334318 15338896 PCT